RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 C2orf50Q96LR7 162 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 PACRGQ96M98 296 aaPredicted RBP6.5□□□□□ -1.37
BEST3-212ENST00000553096 SULT4A1Q9BR01 284 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 NXF5Q9H1B4 397 aaKnown RBP6.5□□□□□ -1.37
BEST3-212ENST00000553096 TMEM231Q9H6L2 316 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 PNO1Q9NRX1 252 aaKnown RBP6.5□□□□□ -1.37
BEST3-212ENST00000553096 MRPL22Q9NWU5 206 aaKnown RBP6.5□□□□□ -1.37
BEST3-212ENST00000553096 ANAPC10Q9UM13 185 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 FLVCR1Q9Y5Y0 555 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 ASCC3Q8N3C0 2202 aaKnown RBP6.5□□□□□ -1.37
BEST3-212ENST00000553096 A6NIZ1 184 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 KCNAB3O43448 404 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 GPANK1O95872 356 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 RAP1BP61224 184 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 RAP1AP62834 184 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 NHLH2Q02577 135 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 ACKR1Q16570 336 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 NSUN5P2Q63ZY6 315 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 C9orf40Q8IXQ3 194 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 PRR22Q8IZ63 422 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 SPEM1Q8N4L4 309 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 OR4D6Q8NGJ1 314 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 OR51A2Q8NGJ7 313 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 MARCH1Q8TCQ1 289 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 CLDN23Q96B33 292 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 NRSN2Q9GZP1 204 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 SLC5A7Q9GZV3 580 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 TAF9BQ9HBM6 251 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 GPR132Q9UNW8 380 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 SLC5A6Q9Y289 635 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 SIT1Q9Y3P8 196 aa6.5□□□□□ -1.37
BEST3-212ENST00000553096 C11orf98E9PRG8 122 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 F12P00748 615 aaPredicted RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 CST4P01036 141 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 IFNA2P01563 188 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 IGHEP01854 428 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 GAPDHP04406 335 aaKnown RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 RCC1P18754 421 aaPredicted RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 PGCP20142 388 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 NFYBP25208 207 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 ITGA3P26006 1051 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 DCAF7P61962 342 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 VAMP2P63027 116 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 OR52W1Q6IF63 320 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 BTNL8Q6UX41 500 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 NAA40Q86UY6 237 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 PPP1R3BQ86XI6 285 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 D2HGDHQ8N465 521 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 SNIP1Q8TAD8 396 aaKnown RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 NEK7Q8TDX7 302 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 TCTEX1D2Q8WW35 142 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 C14orf79Q96F83 325 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 RRNAD1Q96FB5 475 aaKnown RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 KIRREL1Q96J84 757 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 NUDT22Q9BRQ3 303 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 SUCNR1Q9BXA5 334 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 GSX1Q9H4S2 264 aaPredicted RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 CNTD2Q9H8S5 307 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 PARD6AQ9NPB6 346 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 G6PC2Q9NQR9 355 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 SEMA5BQ9P283 1151 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 EMC9Q9Y3B6 208 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 MRPS18CQ9Y3D5 142 aaKnown RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 RHBDD3Q9Y3P4 386 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 TIMM10BQ9Y5J6 103 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 FREM2Q5SZK8 3169 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 LY6G6EA0A0G2JKS1 128 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 FIGNL2A6NMB9 653 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 H0YIZ8 118 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 ADAM10O14672 748 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 JTBO76095 146 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 DXOO77932 396 aaKnown RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 GP1BBP13224 206 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 AGAP20933 346 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 HSD11B2P80365 405 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 INSM1Q01101 510 aaPredicted RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 SLAQ13239 276 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 CLINT1Q14677 625 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 OPN5Q6U736 354 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 COX15Q7KZN9 410 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 GVQW1Q8N7I0 195 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 OR5T1Q8NG75 326 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 ZNF596Q8TC21 504 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 PPP1R14AQ96A00 147 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 HIST1H2BAQ96A08 127 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 S100PBPQ96BU1 408 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 R3HDM4Q96D70 268 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 CPNE2Q96FN4 548 aaPredicted RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 BOD1Q96IK1 185 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 SLC46A1Q96NT5 459 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 TAAR9Q96RI9 348 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 ELF4Q99607 663 aaPredicted RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 FSCN3Q9NQT6 498 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 MRPS17Q9Y2R5 130 aaKnown RBP6.49□□□□□ -1.37
BEST3-212ENST00000553096 FAM96BQ9Y3D0 163 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 U3KQA8 63 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 TMEM269A0A1B0GVZ9 245 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 A0A1W2PQD3 144 aa6.49□□□□□ -1.37
BEST3-212ENST00000553096 CDC14CA4D256 554 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms