RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 UPK1BO75841 260 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 BRI3O95415 125 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 KLF8O95600 359 aaPredicted RBP3.13□□□□□ -1.91
SCAF11-210ENST00000547654 SNAP29O95721 258 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 PTHP01270 115 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 FABP3P05413 133 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 SMIM10L1P0DMW3 83 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 IGHV3-43DP0DP04 118 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 CD1EP15812 388 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 LOXP28300 417 aaPredicted RBP3.13□□□□□ -1.91
SCAF11-210ENST00000547654 UBE2E1P51965 193 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 NCBP2P52298 156 aaKnown RBP eCLIP3.13□□□□□ -1.91
SCAF11-210ENST00000547654 OR12D2P58182 307 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 SLC35A1P78382 337 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 PITPNAQ00169 270 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 SMARCB1Q12824 385 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 ZBTB6Q15916 424 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 DEFB115Q30KQ5 88 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 CLEC18BQ6UXF7 455 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 MRPL52Q86TS9 123 aaKnown RBP3.13□□□□□ -1.91
SCAF11-210ENST00000547654 ZNF440Q8IYI8 595 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 ATPAF2Q8N5M1 289 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 ZNF525Q8N782 197 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 OR2Y1Q8NGV0 311 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 OR4S2Q8NH73 311 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 OR5AK3PQ8NH89 298 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 NEIL3Q8TAT5 605 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 DCUN1D4Q92564 292 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 NTAN1Q96AB6 310 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 SEH1LQ96EE3 360 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 AURKBQ96GD4 344 aaPredicted RBP3.13□□□□□ -1.91
SCAF11-210ENST00000547654 SMIM10Q96HG1 83 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 UBE2E2Q96LR5 201 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 VAT1Q99536 393 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 RBBP8Q99708 897 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 OR11A1Q9GZK7 315 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 NSRP1Q9H0G5 558 aaKnown RBP3.13□□□□□ -1.91
SCAF11-210ENST00000547654 PRO3102Q9H379 93 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 MYOZ1Q9NP98 299 aaPredicted RBP3.13□□□□□ -1.91
SCAF11-210ENST00000547654 SLCO1B3Q9NPD5 702 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 RPS10P5Q9NQ39 176 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 FBXO8Q9NRD0 319 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 SDHAF3Q9NRP4 125 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 FAM49BQ9NUQ9 324 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 UVRAGQ9P2Y5 699 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 ZNF107Q9UII5 783 aaPredicted RBP3.13□□□□□ -1.91
SCAF11-210ENST00000547654 ADAMTS9Q9P2N4 1935 aa3.13□□□□□ -1.91
SCAF11-210ENST00000547654 CEMIPQ8WUJ3 1361 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 ARFGEF2Q9Y6D5 1785 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 GON4LQ3T8J9 2241 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 AFDNP55196 1824 aaKnown RBP3.12□□□□□ -1.91
SCAF11-210ENST00000547654 ANKARQ7Z5J8 1434 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 REV3LO60673 3130 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 IGLV1-36A0A0B4J1U3 117 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 A0A0G2JN53 185 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 FAM240AA0A1B0GVK7 77 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 A0A1W2PPR1 153 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 H7C417 338 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 PEX7O00628 323 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 TOX3O15405 576 aaPredicted RBP3.12□□□□□ -1.91
SCAF11-210ENST00000547654 CTNSO60931 367 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 AHSA1O95433 338 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 ACTL6AO96019 429 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 SLC35G6P0C7Q6 338 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 GABRR1P24046 479 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 CCNE1P24864 410 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 CEACAM6P40199 344 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 MAGEA2P43356 314 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 MAGEA3P43357 314 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 P2RX1P51575 399 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 CTAG1AP78358 180 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 HMGCS1Q01581 520 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 PRKCDQ05655 676 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 KDSRQ06136 332 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 REG3AQ06141 175 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 PON3Q15166 354 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 GUSBP1Q15486 140 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 EXOC3L4Q17RC7 722 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 CDKL4Q5MAI5 379 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 ATAD3CQ5T2N8 411 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 CASC10Q5T4H9 136 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 HBMQ6B0K9 141 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 ZNF493Q6ZR52 646 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 LINC00173Q6ZV60 143 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 FUNDC1Q8IVP5 155 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 DAW1Q8N136 415 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 RNF10Q8N5U6 811 aaKnown RBP3.12□□□□□ -1.91
SCAF11-210ENST00000547654 NPWQ8N729 165 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 UBAC2Q8NBM4 344 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 OR2L2Q8NH16 312 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 ZFAND1Q8TCF1 268 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 SFXN5Q8TD22 340 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 C7orf33Q8WU49 177 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 DCPSQ96C86 337 aaKnown RBP3.12□□□□□ -1.91
SCAF11-210ENST00000547654 DNAJC19Q96DA6 116 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 GALNT14Q96FL9 552 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 RNF145Q96MT1 663 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 GABRG3Q99928 467 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 RASL11BQ9BPW5 248 aa3.12□□□□□ -1.91
SCAF11-210ENST00000547654 COA1Q9GZY4 146 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms