RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 RTL6Q6ICC9 239 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 CLEC18BQ6UXF7 455 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 TMEM105Q8N8V8 129 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 OR5AP2Q8NGF4 316 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 AKR7LQ8NHP1 331 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 MAFIPQ8WZ33 124 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 Q96M66 194 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 TAAR9Q96RI9 348 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 FOXB1Q99853 325 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 NMES1Q9C002 83 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 CHMP1AQ9HD42 196 aaPredicted RBP13.54□□□□□ -0.24
BRF1-212ENST00000547562 EHFQ9NZC4 300 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 MBD2Q9UBB5 411 aa13.54□□□□□ -0.24
BRF1-212ENST00000547562 AHCTF1Q8WYP5 2266 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 A8MXK9 166 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 B8ZZF3 427 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 HTR3BO95264 441 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 LCATP04180 440 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 PATE4P0C8F1 98 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 TMEM225BP0DP42 221 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 PI3P19957 117 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 PSMB6P28072 239 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 LUMP51884 338 aaPredicted RBP13.53□□□□□ -0.24
BRF1-212ENST00000547562 SUPT4H1P63272 117 aaKnown RBP13.53□□□□□ -0.24
BRF1-212ENST00000547562 CEACAM16Q2WEN9 425 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 CCDC157Q569K6 752 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 INO80EQ8NBZ0 244 aaPredicted RBP13.53□□□□□ -0.24
BRF1-212ENST00000547562 RELL2Q8NC24 303 aaPredicted RBP13.53□□□□□ -0.24
BRF1-212ENST00000547562 LINC00052Q96N35 136 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 NECAB3Q96P71 396 aaPredicted RBP13.53□□□□□ -0.24
BRF1-212ENST00000547562 PPA2Q9H2U2 334 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 F10P00742 488 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 FGF2P09038 288 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 GABRR1P24046 479 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 MPLP40238 635 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 HTR5AP47898 357 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 GFRA1P56159 465 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 PSG4Q00888 419 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 FOXO1Q12778 655 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 SLC9A3R2Q15599 337 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 OVCH2Q7RTZ1 564 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 C6orf201Q7Z4U5 140 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 CPNE4Q96A23 557 aaPredicted RBP13.53□□□□□ -0.24
BRF1-212ENST00000547562 CDC6Q99741 560 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 RASL12Q9NYN1 266 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 TIMM10BQ9Y5J6 103 aa13.53□□□□□ -0.24
BRF1-212ENST00000547562 A0A0B4J2A0 478 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 CYTIPO60759 359 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 CNR1P21554 472 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 CYCSP99999 105 aaKnown RBP13.52□□□□□ -0.24
BRF1-212ENST00000547562 CNN3Q15417 329 aaKnown RBP13.52□□□□□ -0.24
BRF1-212ENST00000547562 CHRFAM7AQ494W8 412 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 HSD17B13Q7Z5P4 300 aaPredicted RBP13.52□□□□□ -0.24
BRF1-212ENST00000547562 CPNE2Q96FN4 548 aaPredicted RBP13.52□□□□□ -0.24
BRF1-212ENST00000547562 ZNF75AQ96N20 296 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 DDA1Q9BW61 102 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 ZNF471Q9BX82 626 aaPredicted RBP13.52□□□□□ -0.24
BRF1-212ENST00000547562 SPRY4Q9C004 299 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 METTL9Q9H1A3 318 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 GPR35Q9HC97 309 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 RAB18Q9NP72 206 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 ZNF701Q9NV72 531 aaPredicted RBP13.52□□□□□ -0.24
BRF1-212ENST00000547562 PLEKHJ1Q9NW61 149 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 SHPKQ9UHJ6 478 aa13.52□□□□□ -0.24
BRF1-212ENST00000547562 MCTS1Q9ULC4 181 aaKnown RBP13.52□□□□□ -0.24
BRF1-212ENST00000547562 FAM230AA0A1W2PPH8 454 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 FIGNL2A6NMB9 653 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 SERPINA5P05154 406 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 JMJD7P0C870 316 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 PRKACBP22694 351 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 NUP62P37198 522 aaPredicted RBP13.52□□□□□ -0.25
BRF1-212ENST00000547562 PLXDC2Q6UX71 529 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 ABHD3Q8WU67 409 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 PHYHIPLQ96FC7 376 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 ZNF845Q96IR2 970 aaPredicted RBP13.52□□□□□ -0.25
BRF1-212ENST00000547562 THOC3Q96J01 351 aaKnown RBP13.52□□□□□ -0.25
BRF1-212ENST00000547562 OR2H1Q9GZK4 316 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 WNT5BQ9H1J7 359 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 LRFN1Q9P244 771 aa13.52□□□□□ -0.25
BRF1-212ENST00000547562 IGKV1-27A0A075B6S5 117 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 TEX46H3BTG2 121 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 ANGPTL7O43827 346 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 FAM74A1Q5RGS3 127 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 NSUN5P2Q63ZY6 315 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 SPINK14Q6IE38 97 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.51□□□□□ -0.25
BRF1-212ENST00000547562 EIF4E3Q8N5X7 224 aaKnown RBP13.51□□□□□ -0.25
BRF1-212ENST00000547562 BVESQ8NE79 360 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 PXT1Q8NFP0 134 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 EMG1Q92979 244 aaKnown RBP13.51□□□□□ -0.25
BRF1-212ENST00000547562 ARRDC1-AS1Q9H2J1 176 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 ZNF391Q9UJN7 358 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 BOKQ9UMX3 212 aaPredicted RBP13.51□□□□□ -0.25
BRF1-212ENST00000547562 CSAG2Q9Y5P2 127 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 TRBV6-7A0A0A0MS04 114 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 LOC105371267A0A1B0GV96 52 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 C9orf172C9J069 976 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 KRBOX1C9JBD0 128 aa13.51□□□□□ -0.25
BRF1-212ENST00000547562 SPRY1O43609 319 aaPredicted RBP13.51□□□□□ -0.25
BRF1-212ENST00000547562 GLRA1P23415 457 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms