RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 RIPPLY1Q0D2K3 151 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 ECH1Q13011 328 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 SLC10A1Q14973 349 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 FAM74A1Q5RGS3 127 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 PDSS1Q5T2R2 415 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 TEX261Q6UWH6 196 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 SLC25A26Q70HW3 274 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 SLC36A1Q7Z2H8 476 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 CCDC107Q8WV48 283 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 CPNE4Q96A23 557 aaPredicted RBP11.08□□□□□ -0.64
SCAF11-209ENST00000547018 ZPBPQ9BS86 351 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 OR2H1Q9GZK4 316 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 WNT5BQ9H1J7 359 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 COMMD9Q9P000 198 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 U3KQ87 197 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 TNRC6BQ9UPQ9 1833 aaKnown RBP11.08□□□□□ -0.64
SCAF11-209ENST00000547018 PCSK5Q92824 1860 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF503-AS2A6NEH8 195 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 GEMIN2O14893 280 aaKnown RBP11.08□□□□□ -0.64
SCAF11-209ENST00000547018 LDLRAD4O15165 306 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 SFTPBP07988 381 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 SELEP16581 610 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 DEFB109BQ30KR1 87 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 TMEM229BQ8NBD8 167 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 OR56B2PQ8NGI1 322 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 OR51F2Q8NH61 342 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 APH1AQ96BI3 265 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF488Q96MN9 340 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 MFFQ9GZY8 342 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 MOB1AQ9H8S9 216 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 NPDC1Q9NQX5 325 aaPredicted RBP11.08□□□□□ -0.64
SCAF11-209ENST00000547018 GPR160Q9UJ42 338 aa11.08□□□□□ -0.64
SCAF11-209ENST00000547018 IGKV1D-8A0A087WSZ0 117 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 FTH1P19P0C7X4 201 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 PPP3CBP16298 524 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 GALNT11Q8NCW6 608 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 OR5T2Q8NGG2 359 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 OR56B1Q8NGI3 324 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 AQP3Q92482 292 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 UQCC2Q9BRT2 126 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 DDA1Q9BW61 102 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF442Q9H7R0 627 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 METTL8Q9H825 291 aaKnown RBP11.07□□□□□ -0.64
SCAF11-209ENST00000547018 PTTG3PQ9NZH4 202 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 OPN4Q9UHM6 478 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 SMG1Q96Q15 3661 aaKnown RBP11.07□□□□□ -0.64
SCAF11-209ENST00000547018 TMEM14DPA8MWL7 114 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 SP1P08047 785 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF806P0C7X5 589 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 CD46P15529 392 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 GPM6AP51674 278 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 SOX8P57073 446 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 AIMP2Q13155 320 aaKnown RBP11.07□□□□□ -0.64
SCAF11-209ENST00000547018 STK11Q15831 433 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 PLA2G2CQ5R387 149 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 C10orf128Q5T292 105 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 CRIM1Q9NZV1 1036 aa11.07□□□□□ -0.64
SCAF11-209ENST00000547018 IGKV1-27A0A075B6S5 117 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 G3V3Q6 166 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 LYZL6O75951 148 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 NPBWR2P48146 333 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 GFRA1P56159 465 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 SP6Q3SY56 376 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 ZBTB37Q5TC79 503 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF546Q86UE3 836 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 CDC6Q99741 560 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 PRRT1Q99946 306 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 ZC4H2Q9NQZ6 224 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 KCNN3Q9UGI6 736 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 HPNP05981 417 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 WT1P19544 449 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-209ENST00000547018 GSK3AP49840 483 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 LHX2P50458 406 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 S100A10P60903 97 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 RAP2BP61225 183 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 QRFPP83859 136 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 RAB35Q15286 201 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF766Q5HY98 468 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 PRR18Q8N4B5 295 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 C1orf147Q96MC9 270 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-209ENST00000547018 GPR87Q9BY21 358 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 FANCFQ9NPI8 374 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 IL36RNQ9UBH0 155 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 TRAV39A0A0B4J263 110 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 MPTX1A8MV57 137 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 SYNGR3O43761 229 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 ZNF735P0CB33 412 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 RBP2P50120 134 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 IDH3GP51553 393 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-209ENST00000547018 ATP1B3P54709 279 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 RAG2P55895 527 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 HOXA4Q00056 320 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-209ENST00000547018 FAM209AQ5JX71 171 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 UNQ6126/PRO20091Q6UXV3 157 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 DBX2Q6ZNG2 339 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 MRPL21Q7Z2W9 205 aaKnown RBP11.06□□□□□ -0.64
SCAF11-209ENST00000547018 CALHM1Q8IU99 346 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 FDCSPQ8NFU4 85 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 FER1L6-AS2Q96M78 137 aa11.06□□□□□ -0.64
SCAF11-209ENST00000547018 SLC17A5Q9NRA2 495 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms