RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 OR5P3Q8WZ94 311 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 PIGCQ92535 297 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 TNFRSF14Q92956 283 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 STMN2Q93045 179 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 C12orf43Q96C57 262 aaKnown RBP6.94□□□□□ -1.3
USP28-215ENST00000545608 PPP1R14BQ96C90 147 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 Q96M66 194 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 FEVQ99581 238 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 RBM4BQ9BQ04 359 aaKnown RBP6.94□□□□□ -1.3
USP28-215ENST00000545608 DPAGT1Q9H3H5 408 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 HAO2Q9NYQ3 351 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 TAS2R1Q9NYW7 299 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 NDUFA13Q9P0J0 144 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 ZNF391Q9UJN7 358 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 FAM96BQ9Y3D0 163 aa6.94□□□□□ -1.3
USP28-215ENST00000545608 ANXA2P2A6NMY6 339 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 H3BN98 237 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 M0QZ24 198 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 TIMM23O14925 209 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 NPFFO15130 113 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 AKR7A2O43488 359 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 CST4P01036 141 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 POU1F1P28069 291 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 GINS1Q14691 196 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 FAM98BQ52LJ0 330 aaKnown RBP6.93□□□□□ -1.3
USP28-215ENST00000545608 LRRC10Q5BKY1 277 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 FAM76BQ5HYJ3 339 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 PLBD1Q6P4A8 553 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 GDPGP1Q6ZNW5 385 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 ZNF788Q6ZQV5 615 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 KCTD8Q6ZWB6 473 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 TMEM179BQ7Z7N9 219 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.93□□□□□ -1.3
USP28-215ENST00000545608 CMTM4Q8IZR5 234 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 MFSD4AQ8N468 514 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 OTOSQ8NHW6 89 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 ANGPTL6Q8NI99 470 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 C8orf46Q8TAG6 207 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 GIPC3Q8TF64 312 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 NPRL2Q8WTW4 380 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 HPSE2Q8WWQ2 592 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 H1FXQ92522 213 aaKnown RBP6.93□□□□□ -1.3
USP28-215ENST00000545608 NSL1Q96IY1 281 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 RNF170Q96K19 258 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 GAFA1Q96PS6 74 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 NR1H4Q96RI1 486 aaPredicted RBP6.93□□□□□ -1.3
USP28-215ENST00000545608 PKP2Q99959 881 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 RTL8AQ9BWD3 113 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 MMP27Q9H306 513 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 RGCCQ9H4X1 137 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 C16orf95Q9H693 158 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 TCF7L1Q9HCS4 588 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 ZNRD1Q9P1U0 126 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 KLHDC2Q9Y2U9 406 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 CAB39Q9Y376 341 aaPredicted RBP6.93□□□□□ -1.3
USP28-215ENST00000545608 MPC1Q9Y5U8 109 aa6.93□□□□□ -1.3
USP28-215ENST00000545608 PKD1L1Q8TDX9 2849 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 ZNF816-ZNF321PA0A0X1KG74 233 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 TMEM210A6NLX4 147 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 PRR23D1E9PI22 279 aaPredicted RBP6.92□□□□□ -1.3
USP28-215ENST00000545608 RHBDL1O75783 438 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 TSPAN9O75954 239 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 TSPAN15O95858 294 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 CST1P01037 141 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 LYNP07948 512 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 ACAA1P09110 424 aaPredicted RBP6.92□□□□□ -1.3
USP28-215ENST00000545608 FBP1P09467 338 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 PRR23D2P0DMB1 279 aaPredicted RBP6.92□□□□□ -1.3
USP28-215ENST00000545608 RAP2AP10114 183 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 EEF1B2P24534 225 aaKnown RBP6.92□□□□□ -1.3
USP28-215ENST00000545608 DCTDP32321 178 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 HCCSP53701 268 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 DMRTC1Q5HYR2 192 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 DHRS7BQ6IAN0 325 aaPredicted RBP6.92□□□□□ -1.3
USP28-215ENST00000545608 HCP5Q6MZN7 132 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 CPOQ8IVL8 374 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 ADGRG5Q8IZF4 528 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 OR8B12Q8NGG6 310 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 LRTOMTQ8WZ04 291 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 MED30Q96HR3 178 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 CLPTM1LQ96KA5 538 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 CHID1Q9BWS9 393 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 DNTTIP1Q9H147 329 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 MUC13Q9H3R2 512 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 ELL3Q9HB65 397 aaPredicted RBP6.92□□□□□ -1.3
USP28-215ENST00000545608 NLKQ9UBE8 527 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 SLC25A10Q9UBX3 287 aaPredicted RBP6.92□□□□□ -1.3
USP28-215ENST00000545608 VPREB3Q9UKI3 123 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 MAB21L2Q9Y586 359 aa6.92□□□□□ -1.3
USP28-215ENST00000545608 IGKV1D-17A0A075B6S4 117 aa6.91□□□□□ -1.3
USP28-215ENST00000545608 MEIOCA2RUB1 952 aa6.91□□□□□ -1.3
USP28-215ENST00000545608 DPPA5A6NC42 116 aa6.91□□□□□ -1.3
USP28-215ENST00000545608 BTBD17A6NE02 478 aa6.91□□□□□ -1.3
USP28-215ENST00000545608 ARRDC5A6NEK1 342 aa6.91□□□□□ -1.3
USP28-215ENST00000545608 NKX6-3A6NJ46 265 aa6.91□□□□□ -1.3
USP28-215ENST00000545608 OR2AT4A6NND4 320 aa6.91□□□□□ -1.3
USP28-215ENST00000545608 M0R1W7 72 aa6.91□□□□□ -1.3
USP28-215ENST00000545608 PSMD9O00233 223 aa6.91□□□□□ -1.3
USP28-215ENST00000545608 SIGLEC5O15389 551 aa6.91□□□□□ -1.3
USP28-215ENST00000545608 T-ENOLP0DO92 83 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms