RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SLC7A11Q9UPY5 501 aa13.07□□□□□ -0.32
CCDC78-216ENST00000544996 NKX6-3A6NJ46 265 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 C22orf46C9J442 243 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 H3BSH0 61 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 J3QLW9 94 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 GPR37O15354 613 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 NDUFB3O43676 98 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 RHBDL1O75783 438 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 HTR1AP08908 422 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 ZNF19P17023 458 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 HAAOP46952 286 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 SRSF2Q01130 221 aaKnown RBP13.06□□□□□ -0.32
CCDC78-216ENST00000544996 GALEQ14376 348 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 KRTAP24-1Q3LI83 254 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 ATPAF1Q5TC12 328 aaPredicted RBP13.06□□□□□ -0.32
CCDC78-216ENST00000544996 TMEM244Q5VVB8 128 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 TTC23Q5W5X9 447 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 LPCAT4Q643R3 524 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 RBMS3Q6XE24 437 aaKnown RBP13.06□□□□□ -0.32
CCDC78-216ENST00000544996 OR5T2Q8NGG2 359 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 OR2G2Q8NGZ5 317 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 ST8SIA4Q92187 359 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 AQP3Q92482 292 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 TMIGD2Q96BF3 282 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 UPRTQ96BW1 309 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 C10orf35Q96D05 121 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 SEH1LQ96EE3 360 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 ALG8Q9BVK2 526 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 INPP5EQ9NRR6 644 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 SNTG1Q9NSN8 517 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 NLKQ9UBE8 527 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 POLDIP2Q9Y2S7 368 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 CUBNO60494 3623 aa13.06□□□□□ -0.32
CCDC78-216ENST00000544996 FBN1P35555 2871 aaKnown RBP13.05□□□□□ -0.32
CCDC78-216ENST00000544996 LOC107986453A0A1B0GWG9 222 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 PQLC2LA1A4F0 135 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 ANKRD65E5RJM6 399 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 GATBO75879 557 aaKnown RBP13.05□□□□□ -0.32
CCDC78-216ENST00000544996 RGS9O75916 674 aaPredicted RBP13.05□□□□□ -0.32
CCDC78-216ENST00000544996 CCR9P51686 369 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 LRRC10Q5BKY1 277 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 STUMQ69YW2 141 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 FDX2Q6P4F2 183 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 BTN2A1Q7KYR7 527 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 LHFPL3Q86UP9 236 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 PHC2Q8IXK0 858 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 CYGBQ8WWM9 190 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 C22orf15Q8WYQ4 148 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 MED30Q96HR3 178 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 C4orf36Q96KX1 117 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 SLC6A7Q99884 636 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 RASL12Q9NYN1 266 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 FRRS1LQ9P0K9 344 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 MYRFQ9Y2G1 1151 aa13.05□□□□□ -0.32
CCDC78-216ENST00000544996 OR2AT4A6NND4 320 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 ZNF879B4DU55 563 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 J3QT63 122 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 IGHA1P01876 353 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 ISG15P05161 165 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 RPSAP08865 295 aaKnown RBP13.04□□□□□ -0.32
CCDC78-216ENST00000544996 PEX2P28328 305 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 KIR3DL2P43630 455 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 TGM4P49221 684 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 HILS1P60008 231 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 FGF12P61328 243 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 IL13RA1P78552 427 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 MRPL28Q13084 256 aaKnown RBP13.04□□□□□ -0.32
CCDC78-216ENST00000544996 IKZF1Q13422 519 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 KLF17Q5JT82 389 aaPredicted RBP13.04□□□□□ -0.32
CCDC78-216ENST00000544996 ZNF691Q5VV52 312 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 RDH10Q8IZV5 341 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 SYS1Q8N2H4 156 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 DHRSXQ8N5I4 330 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 FAM216BQ8N7L0 139 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 SETD9Q8NE22 299 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 ANGPTL6Q8NI99 470 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 APH1BQ8WW43 257 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 PP6455Q8WZ26 134 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 PELI1Q96FA3 418 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 C19orf24Q9BVV8 132 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 CHST5Q9GZS9 411 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 MS4A7Q9GZW8 240 aaPredicted RBP13.04□□□□□ -0.32
CCDC78-216ENST00000544996 MRPS18AQ9NVS2 196 aaKnown RBP13.04□□□□□ -0.32
CCDC78-216ENST00000544996 ERVK13-1Q9NX77 482 aa13.04□□□□□ -0.32
CCDC78-216ENST00000544996 MXRA5Q9NR99 2828 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 FAM230AA0A1W2PPH8 454 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 IRGMA1A4Y4 181 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 TOX4O94842 621 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 VENTXO95231 258 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 GABRA2P47869 451 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 FUT6P51993 359 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 NANOS3P60323 173 aaKnown RBP13.03□□□□□ -0.32
CCDC78-216ENST00000544996 ELF3P78545 371 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-216ENST00000544996 GABPB1Q06547 395 aaPredicted RBP13.03□□□□□ -0.32
CCDC78-216ENST00000544996 SMIM21Q3B7S5 101 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 METTL11BQ5VVY1 283 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 ZNF788Q6ZQV5 615 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 POC1AQ8NBT0 407 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 OR52I1Q8NGK6 324 aa13.03□□□□□ -0.32
CCDC78-216ENST00000544996 TRMT10AQ8TBZ6 339 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms