RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 PLPP5Q8NEB5 264 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 OR4K17Q8NGC6 315 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 ASB17Q8WXJ9 295 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 ADIPOR1Q96A54 375 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 BANF2Q9H503 90 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 A8MVM7 634 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 SYT7O43581 403 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 SERPINF1P36955 418 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 LPAR6P43657 344 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 POLR2HP52434 150 aaKnown RBP12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 CD300LFQ8TDQ1 290 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 RNF141Q8WVD5 230 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 DAZLQ92904 295 aaKnown RBP12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 FOXRED1Q96CU9 486 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 PIK3IP1Q96FE7 263 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 FAM71F1Q96KD3 344 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 HES7Q9BYE0 225 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 WWTR1Q9GZV5 400 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 NSG1A0A0A6YYJ2 146 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 IGLV1-36A0A0B4J1U3 117 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 S100A8P05109 93 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 CASP6P55212 293 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 S100A10P60903 97 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 AWAT2Q6E213 333 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 KLHL24Q6TFL4 600 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 UQCC3Q6UW78 93 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 WDFY1Q8IWB7 410 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 ST7LQ8TDW4 575 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 GPER1Q99527 375 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 CHMP1AQ9HD42 196 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 MMACHCQ9Y4U1 282 aa12.62□□□□□ -0.39
SFSWAP-210ENST00000541286 PLPP3O14495 311 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 MPIG6BO95866 241 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 CDAP32320 146 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 CATSPERDQ86XM0 798 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 DTX1Q86Y01 620 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 ADAMTS18Q8TE60 1221 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 MAFIPQ8WZ33 124 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 UTP23Q9BRU9 249 aaKnown RBP12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 SOX7Q9BT81 388 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 SMCO4Q9NRQ5 59 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 URGCP-MRPS24S4R325 110 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 ITGB2P05107 769 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 TPT1P13693 172 aaKnown RBP12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 CD96P40200 585 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 BIDP55957 195 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 NDUFA6P56556 154 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 MST1LQ2TV78 715 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 SSX9Q7RTT3 188 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 OR13C8Q8NGS7 320 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 OR51F2Q8NH61 342 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 SLAMF9Q96A28 289 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 SEC11CQ9BY50 192 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 UNKLQ9H9P5 680 aaKnown RBP12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 ELL3Q9HB65 397 aaPredicted RBP12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 LUZP4Q9P127 313 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 MMP24Q9Y5R2 645 aa12.61□□□□□ -0.39
SFSWAP-210ENST00000541286 PRF1P14222 555 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 CRABP1P29762 137 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 ZNF813Q6ZN06 617 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 ZSCAN4Q8NAM6 433 aaPredicted RBP12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 TMEM104Q8NE00 496 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 DMBX1Q8NFW5 382 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 OR10G3Q8NGC4 313 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 MARS2Q96GW9 593 aaKnown RBP12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 NICN1Q9BSH3 213 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 CFAP46Q8IYW2 2715 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 A0A1W2PP11 408 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 UBE2CO00762 179 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 OR8U9P0C7N5 309 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 NPY4RP50391 375 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 EIF3IQ13347 325 aaKnown RBP12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 ANGPTL5Q86XS5 388 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 NAXEQ8NCW5 288 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 OR8U1Q8NH10 309 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 OR51E1Q8TCB6 317 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 MARCH1Q8TCQ1 289 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 LIPHQ8WWY8 451 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 SLC25A21Q9BQT8 299 aaPredicted RBP12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 SLC26A1Q9H2B4 701 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 OR5AC2Q9NZP5 309 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 KLRF1Q9NZS2 232 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 R4GMQ9 66 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 A0A0G2JMM0 328 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 A0A1W2PPB8 328 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 A0A1W2PRS3 328 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 KIR3DP1A8MWS1 328 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 C1QTNF9BB2RNN3 333 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 H0YIZ8 118 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 TERTO14746 1132 aaKnown RBP12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 C1QTNF9P0C862 333 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 ACKR3P25106 362 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 RAB2AP61019 212 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 CLN3Q13286 438 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 AWAT1Q58HT5 328 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 SLC26A10Q8NG04 563 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 TCTEX1D2Q8WW35 142 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 ADAT3Q96EY9 351 aaPredicted RBP12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 THOC3Q96J01 351 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms