RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ZNF420Q8TAQ5 688 aaPredicted RBP7.92□□□□□ -1.14
DDX55-208ENST00000541259 C14orf79Q96F83 325 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 ELMOD3Q96FG2 381 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 HIST1H2AAQ96QV6 131 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 MICU1Q9BPX6 476 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 SLC22A4Q9H015 551 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 SLITRK2Q9H156 845 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 DYNLRB1Q9NP97 96 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 TMEM138Q9NPI0 162 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 CYSLTR2Q9NS75 346 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 SNTG1Q9NSN8 517 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 FAIMQ9NVQ4 179 aa7.92□□□□□ -1.14
DDX55-208ENST00000541259 RSL24D1Q9UHA3 163 aaKnown RBP7.92□□□□□ -1.14
DDX55-208ENST00000541259 POLQO75417 2590 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 ANXA2P2A6NMY6 339 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 ALDOBP05062 364 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 GRPP07492 148 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 OCMP0CE72 109 aaPredicted RBP7.91□□□□□ -1.14
DDX55-208ENST00000541259 CD37P11049 281 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 SLC2A2P11168 524 aaPredicted RBP7.91□□□□□ -1.14
DDX55-208ENST00000541259 RAB3BP20337 219 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 PRKACBP22694 351 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 CDKN1AP38936 164 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 CD200P41217 278 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 RBP2P50120 134 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 MTCP1P56278 107 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 SNRPD2P62316 118 aaKnown RBP7.91□□□□□ -1.14
DDX55-208ENST00000541259 CCL8P80075 99 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 TNFAIP6P98066 277 aaPredicted RBP7.91□□□□□ -1.14
DDX55-208ENST00000541259 CNN3Q15417 329 aaKnown RBP7.91□□□□□ -1.14
DDX55-208ENST00000541259 KISS1Q15726 138 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 MPPED2Q15777 294 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 CALHM1Q8IU99 346 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 TGIF2LYQ8IUE0 185 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 C11orf53Q8IXP5 236 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 OR5D18Q8NGL1 313 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 ITLN1Q8WWA0 313 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 IGFBPL1Q8WX77 278 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 SPSB1Q96BD6 273 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 DGCR14Q96DF8 476 aaKnown RBP7.91□□□□□ -1.14
DDX55-208ENST00000541259 BORCS8Q96FH0 119 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 MEGF10Q96KG7 1140 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 OR2V2Q96R30 315 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 MDFIQ99750 246 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 VRK1Q99986 396 aaPredicted RBP7.91□□□□□ -1.14
DDX55-208ENST00000541259 BCL7BQ9BQE9 202 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 RTL8AQ9BWD3 113 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 CACNG6Q9BXT2 260 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 BARHL1Q9BZE3 327 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 DCSTAMPQ9H295 470 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 CXXC4Q9H2H0 198 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 OR51I2Q9H344 312 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 BATF3Q9NR55 127 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 UFSP2Q9NUQ7 469 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 TREM2Q9NZC2 230 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 NDUFA13Q9P0J0 144 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 ZDHHC8Q9ULC8 765 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 SLC7A11Q9UPY5 501 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 V9GY05 133 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 ANKRD17O75179 2603 aaKnown RBP7.91□□□□□ -1.14
DDX55-208ENST00000541259 APCP25054 2843 aa7.91□□□□□ -1.14
DDX55-208ENST00000541259 A0A0B4J203 849 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.9□□□□□ -1.14
DDX55-208ENST00000541259 PDCD5O14737 125 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 SLC22A1O15245 554 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 MAGEB3O15480 346 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 SPRY1O43609 319 aaPredicted RBP7.9□□□□□ -1.14
DDX55-208ENST00000541259 NOL3O60936 208 aaKnown RBP7.9□□□□□ -1.14
DDX55-208ENST00000541259 NDUFS7O75251 213 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 PLATP00750 562 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 IL1AP01583 271 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 HPXP02790 462 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 ADH4P08319 380 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 SSTR2P30874 369 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 ZNF93P35789 620 aaPredicted RBP7.9□□□□□ -1.14
DDX55-208ENST00000541259 PMELP40967 661 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 HAAOP46952 286 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 OR3A4PP47883 348 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 PPOXP50336 477 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 ATP1B3P54709 279 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 ZP1P60852 638 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 GNG3P63215 75 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 HOXA4Q00056 320 aaPredicted RBP7.9□□□□□ -1.14
DDX55-208ENST00000541259 ZNF154Q13106 437 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 P2RY14Q15391 338 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 FAM76BQ5HYJ3 339 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 HES5Q5TA89 166 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 ZNF826PQ6ZT77 177 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 LHFPL2Q6ZUX7 228 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 USP43Q70EL4 1123 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 C1QL2Q7Z5L3 287 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 TPRA1Q86W33 373 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 BATF2Q8N1L9 274 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 JAGN1Q8N5M9 183 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 SCCPDHQ8NBX0 429 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 OR4D6Q8NGJ1 314 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 DYNC2LI1Q8TCX1 351 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 TECTBQ96PL2 329 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 SORCS2Q96PQ0 1159 aa7.9□□□□□ -1.14
DDX55-208ENST00000541259 GPER1Q99527 375 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms