RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 WDR86Q86TI4 376 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 C11orf53Q8IXP5 236 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 CIARTQ8N365 385 aaPredicted RBP15.78■□□□□ 0.12
VPS33A-205ENST00000541169 OR51A4Q8NGJ6 313 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 CLDND2Q8NHS1 167 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 UFD1Q92890 307 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 C1orf159Q96HA4 380 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 PGLYRP3Q96LB9 341 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 MIOXQ9UGB7 285 aa15.78■□□□□ 0.12
VPS33A-205ENST00000541169 SIRT4Q9Y6E7 314 aaPredicted RBP15.78■□□□□ 0.12
VPS33A-205ENST00000541169 IGHV3-64DA0A0J9YX35 117 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 B4DSR2 109 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 SULT1B1O43704 296 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 CYB5AP00167 134 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 CYB5R3P00387 301 aaPredicted RBP15.77■□□□□ 0.12
VPS33A-205ENST00000541169 MPZP25189 248 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 HAAOP46952 286 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 IL24Q13007 206 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 MLLT11Q13015 90 aaPredicted RBP15.77■□□□□ 0.12
VPS33A-205ENST00000541169 MICBQ29980 383 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 ZNF404Q494X3 552 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 AVPI1Q5T686 147 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 DCDC5Q6ZRR9 648 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 NLRC3Q7RTR2 1065 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 ZNF367Q7RTV3 350 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 FAM90A1Q86YD7 464 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 OR10AC1Q8NH08 325 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 LRRC29Q8WV35 223 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 AQP3Q92482 292 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 TMEM106AQ96A25 262 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 PPP1R3EQ9H7J1 279 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 ZNF665Q9H7R5 613 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 RHOFQ9HBH0 211 aa15.77■□□□□ 0.12
VPS33A-205ENST00000541169 TRBV5-5A0A0J9YX44 114 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 OOEPA6NGQ2 149 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 SRRM5B3KS81 715 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 NOS1APO75052 506 aaPredicted RBP15.76■□□□□ 0.11
VPS33A-205ENST00000541169 RAB3AP20336 220 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 PCMT1P22061 227 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 LMO4P61968 165 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 PPP3R1P63098 170 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 TPBGQ13641 420 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 C11orf91Q3C1V1 193 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 TEX36Q5VZQ5 186 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 Q8IYB0 196 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 GCSAMQ8N6F7 178 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 RPL3LQ92901 407 aaKnown RBP15.76■□□□□ 0.11
VPS33A-205ENST00000541169 OPALINQ96PE5 141 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 DNTTIP1Q9H147 329 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 TMEM165Q9HC07 324 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 LRCH1Q9Y2L9 728 aa15.76■□□□□ 0.11
VPS33A-205ENST00000541169 CR1P17927 2039 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 FAM230AA0A1W2PPH8 454 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 A6NIN4 97 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 H3BSH0 61 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 CD5LO43866 347 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 LMX1BO60663 402 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 GPX5O75715 221 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 TNFAIP8O95379 198 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 IGHV2-5P01817 119 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 AZGP1P25311 298 aaKnown RBP15.75■□□□□ 0.11
VPS33A-205ENST00000541169 MTCP1P56278 107 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 ZNF529Q6P280 563 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 HAGHLQ6PII5 290 aaPredicted RBP15.75■□□□□ 0.11
VPS33A-205ENST00000541169 ZNF773Q6PK81 442 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 ZNF826PQ6ZT77 177 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 MKXQ8IYA7 352 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 LINC01356Q8N9X3 169 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 RGP1Q92546 391 aaPredicted RBP15.75■□□□□ 0.11
VPS33A-205ENST00000541169 PHYHIPQ92561 330 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 SGCDQ92629 289 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 OR5M11Q96RB7 305 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 MGLLQ99685 303 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 PATZ1Q9HBE1 687 aaKnown RBP15.75■□□□□ 0.11
VPS33A-205ENST00000541169 TMEM138Q9NPI0 162 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 ACOT13Q9NPJ3 140 aa15.75■□□□□ 0.11
VPS33A-205ENST00000541169 HIVEP1P15822 2718 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 MED13LQ71F56 2210 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 ZNF879B4DU55 563 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 ALDOBP05062 364 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 CPEP16870 476 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 NPY4RP50391 375 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 EMX1Q04741 257 aaPredicted RBP15.74■□□□□ 0.11
VPS33A-205ENST00000541169 SMIM21Q3B7S5 101 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 CLEC9AQ6UXN8 241 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 ZFP41Q8N8Y5 198 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 POC1AQ8NBT0 407 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 FGF23Q9GZV9 251 aaPredicted RBP15.74■□□□□ 0.11
VPS33A-205ENST00000541169 DCAF16Q9NXF7 216 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 DNAJB11Q9UBS4 358 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 FOXJ3Q9UPW0 622 aa15.74■□□□□ 0.11
VPS33A-205ENST00000541169 CELSR1Q9NYQ6 3014 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 IGKV1-9A0A0C4DH69 117 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 FOXH1O75593 365 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 HSMCR30P0CW71 290 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 IGHV4-31P0DP07 118 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 FSTP19883 344 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 SOX2P48431 317 aa15.73■□□□□ 0.11
VPS33A-205ENST00000541169 RPS11P62280 158 aaKnown RBP eCLIP15.73■□□□□ 0.11
VPS33A-205ENST00000541169 CDH26Q8IXH8 852 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms