RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ACTA1P68133 377 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 ACSM1Q08AH1 577 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 DBPQ10586 325 aaPredicted RBP8.6□□□□□ -1.03
CDCA3-208ENST00000540683 IKZF1Q13422 519 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 MEDAGQ5VYS4 303 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 TMEM236Q5W0B7 351 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 C12orf73Q69YU5 71 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 STUMQ69YW2 141 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 FIP1L1Q6UN15 594 aaKnown RBP8.6□□□□□ -1.03
CDCA3-208ENST00000540683 GDPGP1Q6ZNW5 385 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 C17orf107Q6ZR85 190 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF561Q8N587 486 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 TCEANCQ8N8B7 351 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 C19orf18Q8NEA5 215 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 BBS1Q8NFJ9 593 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 OR5R1Q8NH85 324 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 C8orf46Q8TAG6 207 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 OR51E1Q8TCB6 317 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 HAVCR2Q8TDQ0 301 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 H1FXQ92522 213 aaKnown RBP8.6□□□□□ -1.03
CDCA3-208ENST00000540683 IL4I1Q96RQ9 567 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 CCL13Q99616 98 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 SIRPDQ9H106 197 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 OR51I2Q9H344 312 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 GPR84Q9NQS5 396 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
CDCA3-208ENST00000540683 IGHV3OR15-7A0A075B7D8 119 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 CENPVL3A0A0U1RRI6 287 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 CCDC182A6NF36 153 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF732B4DXR9 585 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 J3QT63 122 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 HOXA3O43365 443 aaPredicted RBP8.59□□□□□ -1.03
CDCA3-208ENST00000540683 SPRY1O43609 319 aaPredicted RBP8.59□□□□□ -1.03
CDCA3-208ENST00000540683 PRKYO43930 277 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 MPZL2O60487 215 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 MRPL3P09001 348 aaKnown RBP8.59□□□□□ -1.03
CDCA3-208ENST00000540683 UBCP0CG48 685 aaKnown RBP8.59□□□□□ -1.03
CDCA3-208ENST00000540683 MMP9P14780 707 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 NDUFB7P17568 137 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 ACKR3P25106 362 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 GABRA2P47869 451 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 ARF6P62330 175 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 AADACL4Q5VUY2 407 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 BRD3OSQ6XYD6 125 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF788Q6ZQV5 615 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 CCDC121Q6ZUS5 278 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 MOB3CQ70IA8 216 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 C11orf53Q8IXP5 236 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 Q8IYB0 196 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 ELMOD2Q8IZ81 293 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 YIPF7Q8N8F6 280 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 LY6G5BQ8NDX9 201 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 RPL3LQ92901 407 aaKnown RBP8.59□□□□□ -1.03
CDCA3-208ENST00000540683 LHX4Q969G2 390 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 DCTN5Q9BTE1 182 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 GABARAPL3Q9BY60 117 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF696Q9H7X3 374 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 ADGRL4Q9HBW9 690 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF319Q9P2F9 582 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 GLS2Q9UI32 602 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 OR52A1Q9UKL2 312 aa8.59□□□□□ -1.03
CDCA3-208ENST00000540683 SF3B6Q9Y3B4 125 aaKnown RBP8.59□□□□□ -1.03
CDCA3-208ENST00000540683 TENM1Q9UKZ4 2725 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 IGHV3OR16-10A0A075B7F0 116 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 C5orf63A6NC05 138 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 METTL15A6NJ78 407 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 NOS1APO75052 506 aaPredicted RBP8.58□□□□□ -1.04
CDCA3-208ENST00000540683 NXPH2O95156 264 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 NDUFA7O95182 113 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 KNG1P01042 644 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 OCM2P0CE71 109 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 OCMP0CE72 109 aaPredicted RBP8.58□□□□□ -1.04
CDCA3-208ENST00000540683 EGR1P18146 543 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 UBE2E1P51965 193 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 CAPZA1P52907 286 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 EFNB1P98172 346 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 CNN3Q15417 329 aaKnown RBP8.58□□□□□ -1.04
CDCA3-208ENST00000540683 DEFB112Q30KQ8 113 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 HAGHLQ6PII5 290 aaPredicted RBP8.58□□□□□ -1.04
CDCA3-208ENST00000540683 VMO1Q7Z5L0 202 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 WDR86Q86TI4 376 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 LDLRAD3Q86YD5 345 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 CALHM1Q8IU99 346 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 ENTHD1Q8IYW4 607 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 BCL6BQ8N143 479 aaPredicted RBP8.58□□□□□ -1.04
CDCA3-208ENST00000540683 POC1AQ8NBT0 407 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 OR51G2Q8NGK0 314 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 ANGPTL6Q8NI99 470 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 HPSE2Q8WWQ2 592 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 PP6455Q8WZ26 134 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 AQP3Q92482 292 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 SDSLQ96GA7 329 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 LYZL4Q96KX0 146 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 Q96MT0 163 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 PKIBQ9C010 78 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 RIBC2Q9H4K1 309 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 HEXA-AS1Q9H8Q6 139 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 UNKLQ9H9P5 680 aaKnown RBP8.58□□□□□ -1.04
CDCA3-208ENST00000540683 SMURF1Q9HCE7 757 aa8.58□□□□□ -1.04
CDCA3-208ENST00000540683 RAB18Q9NP72 206 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms