RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 ERVK-18Q9QC07 812 aa18.48■□□□□ 0.55
TRIM65-202ENST00000540128 PCDHB10Q9UN67 800 aa18.48■□□□□ 0.55
TRIM65-202ENST00000540128 CEACAM18A8MTB9 384 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 SRRM5B3KS81 715 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.47■□□□□ 0.55
TRIM65-202ENST00000540128 MYL12BO14950 172 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 ZNF16P17020 682 aaPredicted RBP18.47■□□□□ 0.55
TRIM65-202ENST00000540128 EGR1P18146 543 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 WNT4P56705 351 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 TAS2R43P59537 309 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 HOXA4Q00056 320 aaPredicted RBP18.47■□□□□ 0.55
TRIM65-202ENST00000540128 KCNJ8Q15842 424 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 RBM48Q5RL73 367 aaKnown RBP18.47■□□□□ 0.55
TRIM65-202ENST00000540128 ZNF573Q86YE8 665 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 PARP16Q8N5Y8 322 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 DNAAF1Q8NEP3 725 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 RGP1Q92546 391 aaPredicted RBP18.47■□□□□ 0.55
TRIM65-202ENST00000540128 SGCDQ92629 289 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 Q9H521 79 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 TMEM160Q9NX00 188 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 MIOXQ9UGB7 285 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 SLC7A11Q9UPY5 501 aa18.47■□□□□ 0.55
TRIM65-202ENST00000540128 SETD2Q9BYW2 2564 aaPredicted RBP18.46■□□□□ 0.55
TRIM65-202ENST00000540128 TRAV38-1A0A0B4J264 116 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 OOEPA6NGQ2 149 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 A8MV72 311 aaPredicted RBP18.46■□□□□ 0.55
TRIM65-202ENST00000540128 NDUFA2O43678 99 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 ALX3O95076 343 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 CD1AP06126 327 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 MSMBP08118 114 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 MUC1P15941 1255 aaPredicted RBP18.46■□□□□ 0.55
TRIM65-202ENST00000540128 MPZP25189 248 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 FUT6P51993 359 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 DVL1P1P54792 670 aaPredicted RBP18.46■□□□□ 0.55
TRIM65-202ENST00000540128 ACSM1Q08AH1 577 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 FAM166AQ6J272 317 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 DCDC5Q6ZRR9 648 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 OR13C3Q8NGS6 347 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 ZNF671Q8TAW3 534 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 ZNF281Q9Y2X9 895 aa18.46■□□□□ 0.55
TRIM65-202ENST00000540128 POLR3KQ9Y2Y1 108 aaPredicted RBP18.46■□□□□ 0.55
TRIM65-202ENST00000540128 IGKV1-9A0A0C4DH69 117 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 RHBDL1O75783 438 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 MT-ND2P03891 347 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 ACAA1P09110 424 aaPredicted RBP18.45■□□□□ 0.54
TRIM65-202ENST00000540128 ZNF20P17024 532 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 ATF1P18846 271 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 CD80P33681 288 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 BDH1Q02338 343 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 DOC2BQ14184 412 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 SFRP4Q6FHJ7 346 aaPredicted RBP18.45■□□□□ 0.54
TRIM65-202ENST00000540128 HAGHLQ6PII5 290 aaPredicted RBP18.45■□□□□ 0.54
TRIM65-202ENST00000540128 BOLLQ8N9W6 283 aaKnown RBP18.45■□□□□ 0.54
TRIM65-202ENST00000540128 C19orf18Q8NEA5 215 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 DEFB108BQ8NET1 73 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 GPR148Q8TDV2 347 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 GHSRQ92847 366 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 C12orf43Q96C57 262 aaKnown RBP18.45■□□□□ 0.54
TRIM65-202ENST00000540128 MND1Q9BWT6 205 aa18.45■□□□□ 0.54
TRIM65-202ENST00000540128 LSM2Q9Y333 95 aaKnown RBP18.45■□□□□ 0.54
TRIM65-202ENST00000540128 C3orf80F5H4A9 247 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 J3QT63 122 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 RGS10O43665 173 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 PLPP2O43688 288 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 NOS1APO75052 506 aaPredicted RBP18.44■□□□□ 0.54
TRIM65-202ENST00000540128 PRKACBP22694 351 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 HAAOP46952 286 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 CNN3Q15417 329 aaKnown RBP18.44■□□□□ 0.54
TRIM65-202ENST00000540128 PRSS48Q7RTY5 328 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 FAM90A1Q86YD7 464 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 SERPINA12Q8IW75 414 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 OR51F2Q8NH61 342 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 PGLYRP3Q96LB9 341 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 PKIBQ9C010 78 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 DHDHQ9UQ10 334 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 WNK2Q9Y3S1 2297 aa18.44■□□□□ 0.54
TRIM65-202ENST00000540128 IGKV1-27A0A075B6S5 117 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 TRAV20A0A0B4J274 112 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 A8MXK9 166 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 FOXH1O75593 365 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 MICBQ29980 383 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 OR5D14Q8NGL3 314 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 TMEM186Q96B77 213 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 SPSB1Q96BD6 273 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 NEIL1Q96FI4 390 aaPredicted RBP18.43■□□□□ 0.54
TRIM65-202ENST00000540128 ZCCHC4Q9H5U6 513 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 RASL12Q9NYN1 266 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 KAAG1Q9UBP8 84 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 BLOC1S6Q9UL45 172 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 KCNS2Q9ULS6 477 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 LRCH1Q9Y2L9 728 aa18.43■□□□□ 0.54
TRIM65-202ENST00000540128 PPIAL4CA0A0B4J2A2 164 aa18.42■□□□□ 0.54
TRIM65-202ENST00000540128 TRBV5-5A0A0J9YX44 114 aa18.42■□□□□ 0.54
TRIM65-202ENST00000540128 FAM230AA0A1W2PPH8 454 aa18.42■□□□□ 0.54
TRIM65-202ENST00000540128 AKR7A2O43488 359 aa18.42■□□□□ 0.54
TRIM65-202ENST00000540128 ZFP36P26651 326 aaKnown RBP18.42■□□□□ 0.54
TRIM65-202ENST00000540128 RPS11P62280 158 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM65-202ENST00000540128 IL24Q13007 206 aa18.42■□□□□ 0.54
TRIM65-202ENST00000540128 SPHARQ15513 63 aa18.42■□□□□ 0.54
TRIM65-202ENST00000540128 YIF1BQ5BJH7 314 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms