RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 FAM3DQ96BQ1 224 aa9.11□□□□□ -0.95
TNFRSF1A-211ENST00000538363 DIRC2Q96SL1 478 aa9.11□□□□□ -0.95
TNFRSF1A-211ENST00000538363 CST11Q9H112 138 aa9.11□□□□□ -0.95
TNFRSF1A-211ENST00000538363 MS4A5Q9H3V2 200 aa9.11□□□□□ -0.95
TNFRSF1A-211ENST00000538363 CNTD2Q9H8S5 307 aa9.11□□□□□ -0.95
TNFRSF1A-211ENST00000538363 LIN7BQ9HAP6 207 aa9.11□□□□□ -0.95
TNFRSF1A-211ENST00000538363 FBXO9Q9UK97 447 aaPredicted RBP9.11□□□□□ -0.95
TNFRSF1A-211ENST00000538363 A0A075B6Q4 140 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 IGKV1-9A0A0C4DH69 117 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 IGHV3-64DA0A0J9YX35 117 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 LOC100289279A0A1B0GTE1 492 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 METTL21EPA6NDL7 271 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 TRIM64BA6NI03 449 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 TMEM210A6NLX4 147 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 A6NNC1 897 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 DEFB108AA8MXU0 73 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 F5H5P2 479 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 H0YL77 283 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 SPRY1O43609 319 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 CRTAPO75718 401 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 NAT2P11245 290 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 OR3A4PP47883 348 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 RIN1Q13671 783 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 DAZAP2Q15038 168 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 C2orf76Q3KRA6 126 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 SLC22A6Q4U2R8 563 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 SPANXN2Q5MJ10 180 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 TMEM42Q69YG0 159 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 FIP1L1Q6UN15 594 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 SLC25A26Q70HW3 274 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 TMEM200AQ86VY9 491 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 MUC15Q8N387 334 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 BOLLQ8N9W6 283 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 OR11L1Q8NGX0 322 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 S100A16Q96FQ6 103 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 DIRAS2Q96HU8 199 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 NKX3-1Q99801 234 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 GAL3ST1Q99999 423 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 SPOCK3Q9BQ16 436 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 SLC30A2Q9BRI3 323 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 URM1Q9BTM9 101 aaKnown RBP9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 BARHL1Q9BZE3 327 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 ATG5Q9H1Y0 275 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 DIABLOQ9NR28 239 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 UFSP2Q9NUQ7 469 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 GHRLQ9UBU3 117 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 PLEKHB1Q9UF11 243 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 POLDIP2Q9Y2S7 368 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 A3GALT2U3KPV4 340 aa9.1□□□□□ -0.95
TNFRSF1A-211ENST00000538363 USP9XQ93008 2570 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 A0A0B4J203 849 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 PQLC2LA1A4F0 135 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 LRP5LA4QPB2 252 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 WIPF3A6NGB9 483 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 CTDSP2O14595 271 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 LCE2BO14633 110 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 HS3ST1O14792 307 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 ANGPTL7O43827 346 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 HPGDSO60760 199 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 LILRA1O75019 489 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 ZNF780AO75290 641 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 GOSR1O95249 250 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 BPNT1O95861 308 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 MPIG6BO95866 241 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 PAHP00439 452 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 TNFRSF1AP19438 455 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 SERPINA2P20848 420 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 THBS2P35442 1172 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 EVX1P49640 407 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 GMFBP60983 142 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 PDZK1IP1Q13113 114 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 C1orf100Q5SVJ3 147 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 KCNG3Q8TAE7 436 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 LGALS14Q8TCE9 139 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 UBASH3BQ8TF42 649 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 S100ZQ8WXG8 99 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 FAM46BQ96A09 425 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 ITPKCQ96DU7 683 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 SLIRPQ9GZT3 109 aaKnown RBP9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 PPP1R3EQ9H7J1 279 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 FN3KRPQ9HA64 309 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 ASH1LQ9NR48 2969 aaKnown RBP9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 GLS2Q9UI32 602 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 RAB22AQ9UL26 194 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 SPATA2Q9UM82 520 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 ETV7Q9Y603 341 aa9.09□□□□□ -0.95
TNFRSF1A-211ENST00000538363 UBR5O95071 2799 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 IGLV3-9A0A075B6K5 115 aa9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 LRRC30A6NM36 301 aa9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 MMP15P51511 669 aa9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 SCN1BQ07699 218 aa9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 SRSF1Q07955 248 aaKnown RBP eCLIP9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 DYNC1I2Q13409 638 aaKnown RBP9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 UBE2NLQ5JXB2 153 aa9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ASPHD2Q6ICH7 369 aa9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ZNF529Q6P280 563 aa9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 FAM131AQ6UXB0 335 aa9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ZNF611Q8N823 705 aa9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 ZSCAN4Q8NAM6 433 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-211ENST00000538363 CHST4Q8NCG5 386 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms