RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 BABAM2Q9NXR7 383 aa9.46□□□□□ -0.9
TNFRSF1A-208ENST00000536194 CTSZQ9UBR2 303 aa9.46□□□□□ -0.9
TNFRSF1A-208ENST00000536194 OOEPA6NGQ2 149 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 A8MV72 311 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 KIAA1324LA8MWY0 1029 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 B4DSR2 109 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 LGALS8O00214 317 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 PLPP2O43688 288 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 SYNGR1O43759 233 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 MSMBP08118 114 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 WNT2P09544 360 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 CRHBPP24387 322 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 MED21Q13503 144 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 IRF3Q14653 427 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 TEX36Q5VZQ5 186 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DMKNQ6E0U4 476 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 ASPHD2Q6ICH7 369 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 RPL22L1Q6P5R6 122 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 HAGHLQ6PII5 290 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 CRIP3Q6Q6R5 217 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 RNF144BQ7Z419 303 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 CALHM1Q8IU99 346 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 OR13C3Q8NGS6 347 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 OR13C5Q8NGS8 318 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 PP6455Q8WZ26 134 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 SMIM19Q96E16 107 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 PGLYRP3Q96LB9 341 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 CDCA4Q9BXL8 241 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 COMMD4Q9H0A8 199 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DUSP21Q9H596 190 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 CHCHD3Q9NX63 227 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 SCN3BQ9NY72 215 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 PCDHB10Q9UN67 800 aa9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 LSM2Q9Y333 95 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-208ENST00000536194 A0A1B0GW55 424 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 MYL12BO14950 172 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 PHF1O43189 567 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DENRO43583 198 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 GYPAP02724 150 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 MT-ND2P03891 347 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 TFF1P04155 84 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DUX4L2P0CJ85 424 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DUX4L3P0CJ86 424 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DUX4L4P0CJ87 422 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DUX4L5P0CJ88 424 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DUX4L6P0CJ89 424 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DUX4L7P0CJ90 424 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 RPS2P15880 293 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 ZNF20P17024 532 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 AMY2BP19961 511 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 HAAOP46952 286 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DVL1P1P54792 670 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 WNT4P56705 351 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 GMFBP60983 142 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 RPS11P62280 158 aaKnown RBP eCLIP9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 LCN2P80188 198 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 RNLSQ5VYX0 342 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DUX4L9Q6RFH8 374 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 ZNF841Q6ZN19 808 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DCDC5Q6ZRR9 648 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 UTS2BQ765I0 119 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 ANGPTL5Q86XS5 388 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 OR10Z1Q8NGY1 313 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 MYDGFQ969H8 173 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 TMEM186Q96B77 213 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 ZNF488Q96MN9 340 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 OR5M11Q96RB7 305 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 TRIM36Q9NQ86 728 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 HIF1ANQ9NWT6 349 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 DUX4Q9UBX2 424 aa9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 ANK3Q12955 4377 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-208ENST00000536194 TRAV38-1A0A0B4J264 116 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 PNMA8CA0A1B0GUJ8 204 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 FAM230AA0A1W2PPH8 454 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 A8MXK9 166 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 J3QT63 122 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 GATBO75879 557 aaKnown RBP9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 MUC1P15941 1255 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 HOXB4P17483 251 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 ATF1P18846 271 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 MPZP25189 248 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 SOX2P48431 317 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 STUMQ69YW2 141 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 GLCCI1Q86VQ1 547 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 ZNF573Q86YE8 665 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 PARP16Q8N5Y8 322 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 OR5T2Q8NGG2 359 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 OR13C9Q8NGT0 318 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 OR51F2Q8NH61 342 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 TSEN15Q8WW01 171 aaKnown RBP9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 GHSRQ92847 366 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 ORAI1Q96D31 301 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 NEIL1Q96FI4 390 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 SMURF1Q9HCE7 757 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 MMP26Q9NRE1 261 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 SNTG1Q9NSN8 517 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 TMEM160Q9NX00 188 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 MIOXQ9UGB7 285 aa9.43□□□□□ -0.9
TNFRSF1A-208ENST00000536194 KCNS2Q9ULS6 477 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms