RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 AQP3Q92482 292 aa14.94□□□□□ -0.02
DDX55-204ENST00000536079 ZNF488Q96MN9 340 aa14.94□□□□□ -0.02
DDX55-204ENST00000536079 MYCBPQ99417 103 aaPredicted RBP14.94□□□□□ -0.02
DDX55-204ENST00000536079 CHST5Q9GZS9 411 aa14.94□□□□□ -0.02
DDX55-204ENST00000536079 CTSZQ9UBR2 303 aa14.94□□□□□ -0.02
DDX55-204ENST00000536079 DUX4Q9UBX2 424 aa14.94□□□□□ -0.02
DDX55-204ENST00000536079 HHLA2Q9UM44 414 aa14.94□□□□□ -0.02
DDX55-204ENST00000536079 ZFHX3Q15911 3703 aa14.94□□□□□ -0.02
DDX55-204ENST00000536079 SVEP1Q4LDE5 3571 aa14.94□□□□□ -0.02
DDX55-204ENST00000536079 OOEPA6NGQ2 149 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 OR5B21A6NL26 309 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 TMEM212A6NML5 194 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 KIAA1324LA8MWY0 1029 aaPredicted RBP14.93□□□□□ -0.02
DDX55-204ENST00000536079 B4DSR2 109 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 FSTL3O95633 263 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 GYPAP02724 150 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 MSMBP08118 114 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 AMY2BP19961 511 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 CRHBPP24387 322 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 CFHR2P36980 270 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 LCN2P80188 198 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 MRPL28Q13084 256 aaKnown RBP14.93□□□□□ -0.02
DDX55-204ENST00000536079 IRF3Q14653 427 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 TEX36Q5VZQ5 186 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 ASPHD2Q6ICH7 369 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 FAM166AQ6J272 317 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 CALHM1Q8IU99 346 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 BATF2Q8N1L9 274 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 SPICQ8N5J4 248 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 CCDC54Q8NEL0 328 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 OR13C3Q8NGS6 347 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 DUSP21Q9H596 190 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 PLEKHA1Q9HB21 404 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 CHCHD3Q9NX63 227 aaKnown RBP14.93□□□□□ -0.02
DDX55-204ENST00000536079 PCDHB10Q9UN67 800 aa14.93□□□□□ -0.02
DDX55-204ENST00000536079 SONP18583 2426 aaKnown RBP14.93□□□□□ -0.02
DDX55-204ENST00000536079 NIPBLQ6KC79 2804 aaeCLIP14.92□□□□□ -0.02
DDX55-204ENST00000536079 FAM230AA0A1W2PPH8 454 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 SRRM5B3KS81 715 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 PHF1O43189 567 aaPredicted RBP14.92□□□□□ -0.02
DDX55-204ENST00000536079 RRP9O43818 475 aaKnown RBP14.92□□□□□ -0.02
DDX55-204ENST00000536079 MT-ND2P03891 347 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 CCDC159P0C7I6 412 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 HOXB4P17483 251 aaPredicted RBP14.92□□□□□ -0.02
DDX55-204ENST00000536079 HAAOP46952 286 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 CCDC58Q4VC31 144 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 DMKNQ6E0U4 476 aaPredicted RBP14.92□□□□□ -0.02
DDX55-204ENST00000536079 CRIP3Q6Q6R5 217 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 ZNF841Q6ZN19 808 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 IL17RELQ6ZVW7 336 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 MUC20Q8N307 709 aaPredicted RBP14.92□□□□□ -0.02
DDX55-204ENST00000536079 FGFRL1Q8N441 504 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 OR5T2Q8NGG2 359 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 RAB39BQ96DA2 213 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 PGLYRP3Q96LB9 341 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 OR5M11Q96RB7 305 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 ZNF184Q99676 751 aaPredicted RBP14.92□□□□□ -0.02
DDX55-204ENST00000536079 CDCA4Q9BXL8 241 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 RASSF4Q9H2L5 321 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 SNTG1Q9NSN8 517 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 LSM2Q9Y333 95 aaKnown RBP14.92□□□□□ -0.02
DDX55-204ENST00000536079 HIVEP2P31629 2446 aa14.92□□□□□ -0.02
DDX55-204ENST00000536079 ARHGAP32A7KAX9 2087 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 PNMA8CA0A1B0GUJ8 204 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 TRAPPC2LH3BP13 241 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 ZNF12P17014 697 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 ATF1P18846 271 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 SOX2P48431 317 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 DVL1P1P54792 670 aaPredicted RBP14.91□□□□□ -0.02
DDX55-204ENST00000536079 RPS11P62280 158 aaKnown RBP eCLIP14.91□□□□□ -0.02
DDX55-204ENST00000536079 RNLSQ5VYX0 342 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 OR10Z1Q8NGY1 313 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 GHSRQ92847 366 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 TMEM186Q96B77 213 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 C10orf35Q96D05 121 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 ORAI1Q96D31 301 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 COMMD4Q9H0A8 199 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 MMP26Q9NRE1 261 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 HIF1ANQ9NWT6 349 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 SCN3BQ9NY72 215 aa14.91□□□□□ -0.02
DDX55-204ENST00000536079 MYL12BO14950 172 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 DENRO43583 198 aaKnown RBP14.9□□□□□ -0.02
DDX55-204ENST00000536079 AVPP01185 164 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 RPS2P15880 293 aaKnown RBP14.9□□□□□ -0.02
DDX55-204ENST00000536079 ZNF20P17024 532 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 WNT4P56705 351 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 MED21Q13503 144 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 CR1LQ2VPA4 569 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 DCDC5Q6ZRR9 648 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 UTS2BQ765I0 119 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 OR51F2Q8NH61 342 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 PP6455Q8WZ26 134 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 MYDGFQ969H8 173 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 SMIM19Q96E16 107 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 SPACA5Q96QH8 159 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 KCNS2Q9ULS6 477 aa14.9□□□□□ -0.02
DDX55-204ENST00000536079 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.9□□□□□ -0.023e-7■■■■■ 29.7
DDX55-204ENST00000536079 SETD2Q9BYW2 2564 aaPredicted RBP14.9□□□□□ -0.02
DDX55-204ENST00000536079 TRAV38-1A0A0B4J264 116 aa14.89□□□□□ -0.03
DDX55-204ENST00000536079 F8VVB4 439 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms