RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 PPP1R3EQ9H7J1 279 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 SLC25A37Q9NYZ2 338 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 KIAA1456Q9P272 454 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 TMA7Q9Y2S6 64 aaKnown RBP5.02□□□□□ -1.61
CD44-237ENST00000534082 MOB4Q9Y3A3 225 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 HSPE1-MOB4S4R3N1 261 aa5.02□□□□□ -1.61
CD44-237ENST00000534082 LRP1BQ9NZR2 4599 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 MEX3AA1L020 520 aaKnown RBP5.01□□□□□ -1.61
CD44-237ENST00000534082 SDHDO14521 159 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 RBP4P02753 201 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 SHBGP04278 402 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 BPGMP07738 259 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 IFI30P13284 250 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 GLRA1P23415 457 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 DDOSTP39656 456 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 CDX1P47902 265 aaPredicted RBP5.01□□□□□ -1.61
CD44-237ENST00000534082 SLC9A3P48764 834 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 CENPAP49450 140 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 ARHGDIBP52566 201 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 ACTA2P62736 377 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 ACTG2P63267 376 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 ACTC1P68032 377 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 ACTA1P68133 377 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 SRSF3P84103 164 aaKnown RBP5.01□□□□□ -1.61
CD44-237ENST00000534082 FHL1Q13642 323 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 CXorf66Q5JRM2 361 aaPredicted RBP5.01□□□□□ -1.61
CD44-237ENST00000534082 RNLSQ5VYX0 342 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 LCN8Q6JVE9 175 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 TEX38Q6PEX7 206 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 ACP7Q6ZNF0 438 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 FAM122BQ7Z309 247 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 CALHM1Q8IU99 346 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 MSRB3Q8IXL7 192 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 OR6V1Q8N148 313 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 Q8N1Y9 231 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 DRAM1Q8N682 238 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 OR6Q1Q8NGQ2 317 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 OR9I1Q8NGQ6 314 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 OR13C2Q8NGS9 318 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 OR2T27Q8NH04 317 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 C4orf3Q8WVX3 66 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 SPTSSAQ969W0 71 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 BPIFA2Q96DR5 249 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 MICU1Q9BPX6 476 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 RTL8AQ9BWD3 113 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 PAPOLGQ9BWT3 736 aaKnown RBP5.01□□□□□ -1.61
CD44-237ENST00000534082 NUAK2Q9H093 628 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 C1orf21Q9H246 121 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 IKZF5Q9H5V7 419 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 PNRC2Q9NPJ4 139 aaKnown RBP5.01□□□□□ -1.61
CD44-237ENST00000534082 A4GNTQ9UNA3 340 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 RAP2CQ9Y3L5 183 aa5.01□□□□□ -1.61
CD44-237ENST00000534082 APOBP04114 4563 aaKnown RBP5□□□□□ -1.61
CD44-237ENST00000534082 IGHV2-26A0A0B4J1V2 119 aa5□□□□□ -1.61
CD44-237ENST00000534082 TLDC2A0PJX2 215 aa5□□□□□ -1.61
CD44-237ENST00000534082 CXorf65A6NEN9 183 aa5□□□□□ -1.61
CD44-237ENST00000534082 TMEM210A6NLX4 147 aa5□□□□□ -1.61
CD44-237ENST00000534082 M0QX08 132 aa5□□□□□ -1.61
CD44-237ENST00000534082 SLC1A7O00341 560 aa5□□□□□ -1.61
CD44-237ENST00000534082 SLC22A2O15244 555 aa5□□□□□ -1.61
CD44-237ENST00000534082 PTP4A3O75365 173 aa5□□□□□ -1.61
CD44-237ENST00000534082 SPAG7O75391 227 aa5□□□□□ -1.61
CD44-237ENST00000534082 DNAJC8O75937 253 aaPredicted RBP5□□□□□ -1.61
CD44-237ENST00000534082 CD14P08571 375 aa5□□□□□ -1.61
CD44-237ENST00000534082 OR8U8P0C7N1 319 aa5□□□□□ -1.61
CD44-237ENST00000534082 ZNF728P0DKX0 622 aa5□□□□□ -1.61
CD44-237ENST00000534082 SLC2A1P11166 492 aa5□□□□□ -1.61
CD44-237ENST00000534082 IDO1P14902 403 aa5□□□□□ -1.61
CD44-237ENST00000534082 PPIBP23284 216 aaKnown RBP5□□□□□ -1.61
CD44-237ENST00000534082 HTR1DP28221 377 aa5□□□□□ -1.61
CD44-237ENST00000534082 RPL14P50914 215 aaKnown RBP5□□□□□ -1.61
CD44-237ENST00000534082 POLR2JP52435 117 aaKnown RBP5□□□□□ -1.61
CD44-237ENST00000534082 ABCE1P61221 599 aaKnown RBP5□□□□□ -1.61
CD44-237ENST00000534082 GABPB1Q06547 395 aaPredicted RBP5□□□□□ -1.61
CD44-237ENST00000534082 CKAP4Q07065 602 aaKnown RBP5□□□□□ -1.61
CD44-237ENST00000534082 PMS2P11Q13670 270 aa5□□□□□ -1.61
CD44-237ENST00000534082 NFYCQ13952 458 aa5□□□□□ -1.61
CD44-237ENST00000534082 ASPHD1Q5U4P2 390 aa5□□□□□ -1.61
CD44-237ENST00000534082 AGBL2Q5U5Z8 902 aa5□□□□□ -1.61
CD44-237ENST00000534082 KCTD8Q6ZWB6 473 aa5□□□□□ -1.61
CD44-237ENST00000534082 SLC35E3Q7Z769 313 aa5□□□□□ -1.61
CD44-237ENST00000534082 OAFQ86UD1 273 aa5□□□□□ -1.61
CD44-237ENST00000534082 FOXRED2Q8IWF2 684 aa5□□□□□ -1.61
CD44-237ENST00000534082 STPG2Q8N412 459 aa5□□□□□ -1.61
CD44-237ENST00000534082 FAM71E2Q8N5Q1 922 aa5□□□□□ -1.61
CD44-237ENST00000534082 MNS1Q8NEH6 495 aa5□□□□□ -1.61
CD44-237ENST00000534082 OR11H1Q8NG94 326 aa5□□□□□ -1.61
CD44-237ENST00000534082 OR4P4Q8NGL7 312 aa5□□□□□ -1.61
CD44-237ENST00000534082 OR2AJ1Q8NGZ0 328 aa5□□□□□ -1.61
CD44-237ENST00000534082 EME1Q96AY2 570 aa5□□□□□ -1.61
CD44-237ENST00000534082 SORT1Q99523 831 aa5□□□□□ -1.61
CD44-237ENST00000534082 KRTAP4-9Q9BYQ8 210 aa5□□□□□ -1.61
CD44-237ENST00000534082 C20orf27Q9GZN8 174 aa5□□□□□ -1.61
CD44-237ENST00000534082 PAPOLBQ9NRJ5 636 aaKnown RBP5□□□□□ -1.61
CD44-237ENST00000534082 GFOD1Q9NXC2 390 aa5□□□□□ -1.61
CD44-237ENST00000534082 ZIM2Q9NZV7 527 aa5□□□□□ -1.61
CD44-237ENST00000534082 RIMS3Q9UJD0 308 aa5□□□□□ -1.61
CD44-237ENST00000534082 TMEM82A0PJX8 343 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 NUPR2A6NF83 97 aa4.99□□□□□ -1.61
CD44-237ENST00000534082 ANXA2P2A6NMY6 339 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms