RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ZNF879B4DU55 563 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 TMEM178BH3BS89 294 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 CDIPTO14735 213 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 ALX3O95076 343 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 CYB5R3P00387 301 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 RAB3AP20336 220 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 PSMA1P25786 263 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 PSMB9P28065 219 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 NR4A2P43354 598 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 RBP2P50120 134 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 ZNF154Q13106 437 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 ACSM3Q53FZ2 586 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 WDR86Q86TI4 376 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 TGIF2LYQ8IUE0 185 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 CROCCP3Q8IVE0 287 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 PHC2Q8IXK0 858 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 C11orf53Q8IXP5 236 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 SCCPDHQ8NBX0 429 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 DNAAF1Q8NEP3 725 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 OR13C5Q8NGS8 318 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 ZNF671Q8TAW3 534 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 TRMT10AQ8TBZ6 339 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 RPL3LQ92901 407 aaKnown RBP9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 TMEM203Q969S6 136 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 SPSB1Q96BD6 273 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 BORCS8Q96FH0 119 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 OPALINQ96PE5 141 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 BPESC1Q9GZL8 116 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 FGF23Q9GZV9 251 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 OR51I2Q9H344 312 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 RNF7Q9UBF6 113 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 CKLFQ9UBR5 152 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 NPTNQ9Y639 398 aa9.48□□□□□ -0.89
TRAPPC4-211ENST00000533012 ARFGEF3Q5TH69 2177 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 IGKV1-9A0A0C4DH69 117 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 A0A1W2PPK0 400 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 hCG_1807616A0A1W2PRN6 198 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 PQLC2LA1A4F0 135 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 TRIM64BA6NI03 449 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 VWC2LB2RUY7 222 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 MAGEB3O15480 346 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 SULT1B1O43704 296 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 INMTO95050 263 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 AZGP1P25311 298 aaKnown RBP9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 MAPK3P27361 379 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 TGFBR2P37173 567 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 HAAOP46952 286 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 ATP1B3P54709 279 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 MTCP1P56278 107 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 PPP3R1P63098 170 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 HAGHLQ6PII5 290 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 UNQ9370/PRO34162Q6UXP9 181 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 SPNS3Q6ZMD2 512 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 ZNF826PQ6ZT77 177 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 LHFPL2Q6ZUX7 228 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 CEACAM19Q7Z692 300 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 OR13C9Q8NGT0 318 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 NPRL2Q8WTW4 380 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 OR14A2Q96R54 314 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 FUNDC2Q9BWH2 189 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 REG4Q9BYZ8 158 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 TLNRD1Q9H1K6 362 aa9.47□□□□□ -0.89
TRAPPC4-211ENST00000533012 PPIAL4EA0A075B759 164 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 TRBV5-7A0A0A0MS05 114 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 RNF223E7ERA6 249 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 PPIAL4DF5H284 164 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 CCRL2O00421 344 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 GPX5O75715 221 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 GABARAPO95166 117 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 LHBP01229 141 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 HCKP08631 526 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 PPIAL4FP0DN26 164 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 USF1P22415 310 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 GABRA5P31644 462 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 CFHR2P36980 270 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 BTG1P62324 171 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 DCTN2Q13561 401 aaKnown RBP9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 DGUOKQ16854 277 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 AVPI1Q5T686 147 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 WDR82Q6UXN9 313 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 ANGPTL5Q86XS5 388 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 BOLLQ8N9W6 283 aaKnown RBP9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 OR10Z1Q8NGY1 313 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 LRRC29Q8WV35 223 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 DERL3Q96Q80 235 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 NOX4Q9NPH5 578 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 TMEM138Q9NPI0 162 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 DCAF16Q9NXF7 216 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 TAS2R4Q9NYW5 299 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 FOXJ3Q9UPW0 622 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 WIPI2Q9Y4P8 454 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 PPIAL4AQ9Y536 164 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 AKAP9Q99996 3911 aa9.46□□□□□ -0.9
TRAPPC4-211ENST00000533012 ISPDA4D126 451 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 J3QT63 122 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 FSTL3O95633 263 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 CYB5AP00167 134 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 ALDOBP05062 364 aa9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 RBMXP38159 391 aaKnown RBP9.45□□□□□ -0.9
TRAPPC4-211ENST00000533012 RPS25P62851 125 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms