RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 RBP2P50120 134 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 SNRPD2P62316 118 aaKnown RBP9.05□□□□□ -0.96
SOX6-213ENST00000530378 CCL8P80075 99 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 TLE4Q04727 773 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 CEACAM21Q3KPI0 293 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 GLT8D1Q68CQ7 371 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 AWAT2Q6E213 333 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 HAGHLQ6PII5 290 aaPredicted RBP9.05□□□□□ -0.96
SOX6-213ENST00000530378 ZNF826PQ6ZT77 177 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 NKAIN3Q8N8D7 197 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 OR10K1Q8NGX5 313 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 TNFAIP8L1Q8WVP5 186 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 ITLN1Q8WWA0 313 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 ZNF488Q96MN9 340 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 OR2V2Q96R30 315 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 VRK1Q99986 396 aaPredicted RBP9.05□□□□□ -0.96
SOX6-213ENST00000530378 GAL3ST1Q99999 423 aa9.05□□□□□ -0.96
SOX6-213ENST00000530378 ELL3Q9HB65 397 aaPredicted RBP9.05□□□□□ -0.96
SOX6-213ENST00000530378 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.04□□□□□ -0.96
SOX6-213ENST00000530378 IFITM5A6NNB3 132 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 NOTOA8MTQ0 251 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 B9A039 149 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 SYNGR1O43759 233 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 PRKACBP22694 351 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 CDKN1AP38936 164 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 FUT6P51993 359 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 ATP1B3P54709 279 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 TNFAIP6P98066 277 aaPredicted RBP9.04□□□□□ -0.96
SOX6-213ENST00000530378 PLA2G7Q13093 441 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 MAB21L1Q13394 359 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 MPPED2Q15777 294 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 RAB11BQ15907 218 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 DMRTA1Q5VZB9 504 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 ZNF787Q6DD87 383 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 OR10K2Q6IF99 312 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 LHFPL2Q6ZUX7 228 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 C1QL2Q7Z5L3 287 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 TPRA1Q86W33 373 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 TGIF2LYQ8IUE0 185 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 ZNF671Q8TAW3 534 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 LGALS14Q8TCE9 139 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 FAM46BQ96A09 425 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 SLAMF9Q96A28 289 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 SPSB1Q96BD6 273 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 PSMG3-AS1Q96PY0 264 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 C6orf62Q9GZU0 229 aaPredicted RBP9.04□□□□□ -0.96
SOX6-213ENST00000530378 METTL17Q9H7H0 456 aaPredicted RBP9.04□□□□□ -0.96
SOX6-213ENST00000530378 LIN7BQ9HAP6 207 aa9.04□□□□□ -0.96
SOX6-213ENST00000530378 MRPS28Q9Y2Q9 187 aaKnown RBP9.04□□□□□ -0.96
SOX6-213ENST00000530378 A0A1W2PP11 408 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 hCG_1807616A0A1W2PRN6 198 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 AIPO00170 330 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 CDIPTO14735 213 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 RHBDL1O75783 438 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 LY6HO94772 140 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 CD8AP01732 235 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 TMEM225BP0DP42 221 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 PRF1P14222 555 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 HTR2CP28335 458 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 SOX6P35712 828 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 RORCP51449 518 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 SNU13P55769 128 aaKnown RBP9.03□□□□□ -0.96
SOX6-213ENST00000530378 GNG3P63215 75 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 ZNF154Q13106 437 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 EFNB3Q15768 340 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 SWI5Q1ZZU3 235 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 SLC25A26Q70HW3 274 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 MOGAT3Q86VF5 341 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 ZNF295-AS1Q8N0V1 137 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 ZNF611Q8N823 705 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 DTX3Q8N9I9 347 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 BOLLQ8N9W6 283 aaKnown RBP9.03□□□□□ -0.96
SOX6-213ENST00000530378 OR51D1Q8NGF3 324 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 OR5H6Q8NGV6 325 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 CACNG6Q9BXT2 260 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 CXXC4Q9H2H0 198 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 LIME1Q9H400 295 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 FAIMQ9NVQ4 179 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 NKIRAS2Q9NYR9 191 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 CCDC59Q9P031 241 aaKnown RBP9.03□□□□□ -0.96
SOX6-213ENST00000530378 COMMD3Q9UBI1 195 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 ING4Q9UNL4 249 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 MAP1AP78559 2803 aaPredicted RBP9.03□□□□□ -0.96
SOX6-213ENST00000530378 TEX15Q9BXT5 2789 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 ARID1AO14497 2285 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 CSMD1Q96PZ7 3565 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 TRIM64BA6NI03 449 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 OR5B21A6NL26 309 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 C17orf100A8MU93 164 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 SLC17A2O00624 439 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 CDC14BO60729 498 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 DANCRP0C864 163 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 SERPINA2P20848 420 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 ZP1P60852 638 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 SLC22A6Q4U2R8 563 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 AGAP6Q5VW22 663 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 GLIPR1L1Q6UWM5 242 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 PNLDC1Q8NA58 520 aaKnown RBP9.03□□□□□ -0.96
SOX6-213ENST00000530378 SCCPDHQ8NBX0 429 aa9.03□□□□□ -0.96
SOX6-213ENST00000530378 OR5A2Q8NGI9 324 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms