RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 SOX7Q9BT81 388 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 PPP1R3EQ9H7J1 279 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 HIF1ANQ9NWT6 349 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 ANKRD10Q9NXR5 420 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 A0A1B0GTH9 108 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 CLEC12BQ2HXU8 276 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 GPR137Q96N19 417 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 SLC35D1Q9NTN3 355 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 CLEC1BQ9P126 229 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 NEU3Q9UQ49 428 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 RANP62826 216 aaKnown RBP13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 KLF9Q13886 244 aaPredicted RBP13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 MRPS18AQ9NVS2 196 aaKnown RBP13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 NTF3P20783 257 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 SP6Q3SY56 376 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 SMUG1Q53HV7 270 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 OR2A2Q6IF42 318 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 UBAC2Q8NBM4 344 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 OR1F12Q8NHA8 337 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 ZDHHC11Q9H8X9 412 aa13.8□□□□□ -0.2
PCDHA4-203ENST00000530339 C2CD4DB7Z1M9 353 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 TRAF3IP2O43734 574 aaPredicted RBP13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 GLRA1P23415 457 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 ISXQ2M1V0 245 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 GABRG3Q99928 467 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 OR10J4P0C629 311 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 FUT3P21217 361 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 PAX6P26367 422 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 ABCD3P28288 659 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 GABRA4P48169 554 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 UBE2G1P62253 170 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 LYPD8Q6UX82 237 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 RNF24Q9Y225 148 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 ATP23Q9Y6H3 246 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 KIF13BQ9NQT8 1826 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 OR2W5A6NFC9 320 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 H3BP45 60 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 PIAS2O75928 621 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 HES1Q14469 280 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 SMIM21Q3B7S5 101 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 TMEM91Q6ZNR0 172 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 TSPAN32Q96QS1 320 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 FBXO34Q9NWN3 711 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 CLEC18AA5D8T8 446 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 ST8SIA5O15466 376 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 ANGPTL7O43827 346 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 EPPINO95925 133 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 PGA3P0DJD8 388 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 ETFBKMTQ8IXQ9 262 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 CLEC18CQ8NCF0 446 aa13.79□□□□□ -0.2
PCDHA4-203ENST00000530339 A0A1W2PQD3 144 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 ZNF117Q03924 483 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 DMRTC1Q5HYR2 192 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 FAM173AQ9BQD7 235 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 FBXL17Q9UF56 701 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 ZNF107Q9UII5 783 aaPredicted RBP13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 H0Y8G0 127 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 HYAL3O43820 417 aaPredicted RBP13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 KISS1Q15726 138 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 UBE3DQ7Z6J8 389 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 PIK3IP1Q96FE7 263 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 MRM2Q9UI43 246 aaKnown RBP13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 ASCC3Q8N3C0 2202 aaKnown RBP13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 HAAOP46952 286 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 SLC37A1P57057 533 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 SUMO1P63165 101 aaKnown RBP13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 OR2B11Q5JQS5 317 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 ZNF547Q8IVP9 402 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 OR5AS1Q8N127 324 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 C8orf44Q96CB5 159 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 FOXB1Q99853 325 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 UCK1Q9HA47 277 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 SIRPB1O00241 398 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 TNFSF11O14788 317 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 BPIFB3P59826 476 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 PMP22Q01453 160 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 RNPS1Q15287 305 aaKnown RBP13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 ZNF66Q6ZN08 573 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 PTP4A1Q93096 173 aa13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 ZNF275Q9NSD4 429 aaPredicted RBP13.78□□□□□ -0.2
PCDHA4-203ENST00000530339 AP4M1O00189 453 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 SPRY1O43609 319 aaPredicted RBP13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 CTSVO60911 334 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 CRHP06850 196 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 CDAP32320 146 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 FABP6P51161 128 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 IQCJQ1A5X6 159 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 COL13A1Q5TAT6 717 aaPredicted RBP13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 TRAT1Q6PIZ9 186 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 SLC16A13Q7RTY0 426 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 KLHDC1Q8N7A1 406 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 AKR7LQ8NHP1 331 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 SEC11CQ9BY50 192 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 CTDSP1Q9GZU7 261 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 ABCD4O14678 606 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 SLC25A4P12235 298 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 FBXL14Q8N1E6 418 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 OR6S1Q8NH40 331 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 OR5B3Q8NH48 314 aa13.77□□□□□ -0.2
PCDHA4-203ENST00000530339 FBLIM1Q8WUP2 373 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms