RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 NTM-AS1Q6ZSK4 140 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 Q6ZT83 130 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 PGAM4Q8N0Y7 254 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 ARRDC1Q8N5I2 433 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 TMEM156Q8N614 296 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 COX18Q8N8Q8 333 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 OR11H7Q8NGC8 314 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 OR10W1Q8NGF6 305 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 CDC26Q8NHZ8 85 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 OR51E1Q8TCB6 317 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 PIFOQ8TCI5 191 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 LRRC29Q8WV35 223 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 RGP1Q92546 391 aaPredicted RBP2.83□□□□□ -1.96
C11orf88-204ENST00000529661 TM4SF18Q96CE8 201 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 WDR34Q96EX3 536 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 ADTRPQ96IZ2 230 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 BTN2A3PQ96KV6 586 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 UBE2E2Q96LR5 201 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 PARD6GQ9BYG4 376 aaPredicted RBP2.83□□□□□ -1.96
C11orf88-204ENST00000529661 EDA2RQ9HAV5 297 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 C12orf10Q9HB07 376 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 MED4Q9NPJ6 270 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 NLE1Q9NVX2 485 aaPredicted RBP2.83□□□□□ -1.96
C11orf88-204ENST00000529661 TRMT112Q9UI30 125 aaKnown RBP2.83□□□□□ -1.96
C11orf88-204ENST00000529661 ABCB11O95342 1321 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 VWA8A3KMH1 1905 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 PALLDQ8WX93 1383 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 LRP4O75096 1905 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 TET2Q6N021 2002 aaPredicted RBP2.82□□□□□ -1.96
C11orf88-204ENST00000529661 SMIM23A6NLE4 172 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 GABRPO00591 440 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 CRXO43186 299 aaPredicted RBP2.82□□□□□ -1.96
C11orf88-204ENST00000529661 ADAP1O75689 374 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 RBBP9O75884 186 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 SEMA3DO95025 777 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 SLC25A14O95258 325 aaPredicted RBP2.82□□□□□ -1.96
C11orf88-204ENST00000529661 DEXIO95424 95 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 CD8AP01732 235 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 ORM1P02763 201 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 OCM2P0CE71 109 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 PGA4P0DJD7 388 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 PGA3P0DJD8 388 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 GIMD1P0DJR0 217 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 HLA-DMAP28067 261 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 SSTR5P35346 364 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 CDKN2CP42773 168 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 C2orf54Q08AI8 447 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 BNIP2Q12982 314 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 ZNF266Q14584 549 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 GUSBP1Q15486 140 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 ZNHIT3Q15649 155 aaPredicted RBP2.82□□□□□ -1.96
C11orf88-204ENST00000529661 UAP1Q16222 522 aaPredicted RBP2.82□□□□□ -1.96
C11orf88-204ENST00000529661 FAM27D1Q5T7N8 215 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 NIPAL1Q6NVV3 410 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 LFNGQ8NES3 379 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 RNASEH2CQ8TDP1 164 aaKnown RBP2.82□□□□□ -1.96
C11orf88-204ENST00000529661 C15orf40Q8WUR7 153 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 RNF133Q8WVZ7 376 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 OR5P2Q8WZ92 322 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 TIMM17AQ99595 171 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 PDCD1LG2Q9BQ51 273 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 ING2Q9H160 280 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 OR51B5Q9H339 312 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 PRORYQ9H606 182 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 HMG20AQ9NP66 347 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 ACOT13Q9NPJ3 140 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 ASCL3Q9NQ33 180 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 PLEKHJ1Q9NW61 149 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 KLK12Q9UKR0 248 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 AP3M1Q9Y2T2 418 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 SNX24Q9Y343 169 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 USH1CQ9Y6N9 552 aa2.82□□□□□ -1.96
C11orf88-204ENST00000529661 IGLV3-16A0A075B6K0 115 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 IGHV2OR16-5A0A0B4J2B6 119 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 IGKV1-8A0A0C4DH67 115 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 A0A0U1RQV1 116 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 SYCE1LA8MT33 242 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 CENPBD1B2RD01 187 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 M0R1B8 84 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 DNASE2O00115 360 aaPredicted RBP2.81□□□□□ -1.96
C11orf88-204ENST00000529661 CDIPTO14735 213 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 CTNSO60931 367 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 GCM2O75603 506 aaPredicted RBP2.81□□□□□ -1.96
C11orf88-204ENST00000529661 RPP14O95059 124 aaKnown RBP2.81□□□□□ -1.96
C11orf88-204ENST00000529661 YIF1AO95070 293 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 TTC4O95801 387 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 ACTR1BP42025 376 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 PPICP45877 212 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 PPOXP50336 477 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 RAB7AP51149 207 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 SYNJ2BPP57105 145 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 BASP1P80723 227 aaKnown RBP2.81□□□□□ -1.96
C11orf88-204ENST00000529661 CD164Q04900 197 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 PRKCDQ05655 676 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 STX4Q12846 297 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 TMEM31Q5JXX7 168 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 ZFP2Q6ZN57 461 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 Q6ZR03 302 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 RAB43Q86YS6 212 aa2.81□□□□□ -1.96
C11orf88-204ENST00000529661 BBS7Q8IWZ6 715 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms