RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 IGKV1-9A0A0C4DH69 117 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 IGHV3-64DA0A0J9YX35 117 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 ZNF879B4DU55 563 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 RNF223E7ERA6 249 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 J3QT63 122 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 SULT1B1O43704 296 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 GPX5O75715 221 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 FOSL1P15407 271 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 FSTP19883 344 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 CPT2P23786 658 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 RBP2P50120 134 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 BTG1P62324 171 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 LIPKQ5VXJ0 399 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 LHFPL2Q6ZUX7 228 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 PHC2Q8IXK0 858 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 MUC20Q8N307 709 aaPredicted RBP17.45■□□□□ 0.38
CD44-222ENST00000526025 OR13C5Q8NGS8 318 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 BORCS8Q96FH0 119 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 PKIBQ9C010 78 aa17.45■□□□□ 0.38
CD44-222ENST00000526025 MED13LQ71F56 2210 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 F8P00451 2351 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 A0A087WXM4 84 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 SRRM5B3KS81 715 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 H7C1Q1 480 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 CDIPTO14735 213 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 SC5DO75845 299 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 CYB5R3P00387 301 aaPredicted RBP17.44■□□□□ 0.38
CD44-222ENST00000526025 ACAA1P09110 424 aaPredicted RBP17.44■□□□□ 0.38
CD44-222ENST00000526025 RAB3AP20336 220 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 AZGP1P25311 298 aaKnown RBP17.44■□□□□ 0.38
CD44-222ENST00000526025 MDH2P40926 338 aaKnown RBP17.44■□□□□ 0.38
CD44-222ENST00000526025 SOX2P48431 317 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 ARMCX4Q5H9R4 360 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 UNQ9370/PRO34162Q6UXP9 181 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 LRRC28Q86X40 367 aaPredicted RBP17.44■□□□□ 0.38
CD44-222ENST00000526025 GCSAMQ8N6F7 178 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 OR13C9Q8NGT0 318 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 ZNF671Q8TAW3 534 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 AQP3Q92482 292 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 RPL3LQ92901 407 aaKnown RBP17.44■□□□□ 0.38
CD44-222ENST00000526025 DERL3Q96Q80 235 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 CKLFQ9UBR5 152 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 POLDIP2Q9Y2S7 368 aa17.44■□□□□ 0.38
CD44-222ENST00000526025 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.43■□□□□ 0.38
CD44-222ENST00000526025 PPIAL4EA0A075B759 164 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 IGHV4-61A0A0C4DH41 118 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 hCG_1807616A0A1W2PRN6 198 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 PPIAL4DF5H284 164 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 PPIAL4FP0DN26 164 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 GABRA5P31644 462 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 HAAOP46952 286 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 ATP1B3P54709 279 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 IL24Q13007 206 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 ASPHD2Q6ICH7 369 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 HAGHLQ6PII5 290 aaPredicted RBP17.43■□□□□ 0.38
CD44-222ENST00000526025 ZNF826PQ6ZT77 177 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 SPICQ8N5J4 248 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 TSPAN14Q8NG11 270 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 TRMT10AQ8TBZ6 339 aaKnown RBP17.43■□□□□ 0.38
CD44-222ENST00000526025 LRRC29Q8WV35 223 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 PHYHIPQ92561 330 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 CPNE2Q96FN4 548 aaPredicted RBP17.43■□□□□ 0.38
CD44-222ENST00000526025 C18orf12Q96KH6 178 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 OR14A2Q96R54 314 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 NDUFB11Q9NX14 153 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 SF3B6Q9Y3B4 125 aaKnown RBP17.43■□□□□ 0.38
CD44-222ENST00000526025 PPIAL4AQ9Y536 164 aa17.43■□□□□ 0.38
CD44-222ENST00000526025 FAM230AA0A1W2PPH8 454 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 TRIM64CA6NLI5 447 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 NOS1APO75052 506 aaPredicted RBP17.42■□□□□ 0.38
CD44-222ENST00000526025 ALDOBP05062 364 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 OCMP0CE72 109 aaPredicted RBP17.42■□□□□ 0.38
CD44-222ENST00000526025 IGFBP3P17936 291 aaPredicted RBP17.42■□□□□ 0.38
CD44-222ENST00000526025 PPP3R1P63098 170 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 ZMYND11Q15326 602 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 KCNJ8Q15842 424 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 ACSM3Q53FZ2 586 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 DMRTC1Q5HYR2 192 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 C12orf43Q96C57 262 aaKnown RBP17.42■□□□□ 0.38
CD44-222ENST00000526025 TMED9Q9BVK6 235 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 TAS2R4Q9NYW5 299 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 FOXJ3Q9UPW0 622 aa17.42■□□□□ 0.38
CD44-222ENST00000526025 ABCA2Q9BZC7 2435 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 IGKV1-27A0A075B6S5 117 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 TRAV38-1A0A0B4J264 116 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 LGALS8O00214 317 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 HEXAP06865 529 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 CD99P14209 185 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 MUC1P15941 1255 aaPredicted RBP17.41■□□□□ 0.38
CD44-222ENST00000526025 GALP22466 123 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 ZNF404Q494X3 552 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 AVPI1Q5T686 147 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 SYT6Q5T7P8 510 aaPredicted RBP17.41■□□□□ 0.38
CD44-222ENST00000526025 TEX36Q5VZQ5 186 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 CIARTQ8N365 385 aaPredicted RBP17.41■□□□□ 0.38
CD44-222ENST00000526025 NPRL2Q8WTW4 380 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 TMEM165Q9HC07 324 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 VCX3AQ9NNX9 186 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 TMEM138Q9NPI0 162 aa17.41■□□□□ 0.38
CD44-222ENST00000526025 RASL12Q9NYN1 266 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms