RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 TATDN3Q17R31 274 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 GSG1Q2KHT4 349 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 ISXQ2M1V0 245 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 PGGHGQ32M88 737 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 PTPN20Q4JDL3 420 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 IFI44LQ53G44 452 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 AVPI1Q5T686 147 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 OGFRL1Q5TC84 451 aaPredicted RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 SLC22A10Q63ZE4 541 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 DNM1P34Q6PK57 102 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 TEX261Q6UWH6 196 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 DRAM2Q6UX65 266 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 SCD5Q86SK9 330 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 DHDDSQ86SQ9 333 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 LRRC28Q86X40 367 aaPredicted RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 TMEM25Q86YD3 366 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 LAX1Q8IWV1 398 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 Q8N402 240 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 STPG2Q8N412 459 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 BCORP1Q8N888 145 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 CDRT4Q8N9R6 151 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 ST6GALNAC3Q8NDV1 305 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 FBXO36Q8NEA4 188 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 FAM71CQ8NEG0 241 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 B3GNT7Q8NFL0 401 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 OR2Z1Q8NG97 314 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 OR10X1Q8NGY0 326 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 OR6K3Q8NGY3 331 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 OR4S2Q8NH73 311 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 OR5K1Q8NHB7 308 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 TCTEX1D2Q8WW35 142 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 APH1BQ8WW43 257 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 CYGBQ8WWM9 190 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 SMARCD2Q92925 531 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 PTH2Q96A98 100 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 CCDC124Q96CT7 223 aaKnown RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 BTN2A3PQ96KV6 586 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 NOL4LQ96MY1 436 aaPredicted RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 PANX3Q96QZ0 392 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 OR8B4Q96RC9 309 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 AIF1LQ9BQI0 150 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 DCUN1D5Q9BTE7 237 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 SUCNR1Q9BXA5 334 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 NXF2Q9GZY0 626 aaKnown RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 SIRPDQ9H106 197 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 ARV1Q9H2C2 271 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 IKZF5Q9H5V7 419 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 MEAF6Q9HAF1 191 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 PLEKHA1Q9HB21 404 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 RHOFQ9HBH0 211 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 SLC25A19Q9HC21 320 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 EML4Q9HC35 981 aaKnown RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 PRSS16Q9NQE7 514 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 MIEF1Q9NQG6 463 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 GDF3Q9NR23 364 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 SAR1AQ9NR31 198 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 DDIT4Q9NX09 232 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 TMEM161AQ9NX61 479 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 FBXL12Q9NXK8 326 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 PRO0461Q9UI25 63 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 KIF25Q9UIL4 384 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 ZNF223Q9UK11 482 aaPredicted RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 ING4Q9UNL4 249 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 U3KQ87 197 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 KIF20BQ96Q89 1820 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 UTRNP46939 3433 aa2.77□□□□□ -1.97
CD44-217ENST00000525348 N4BP2Q86UW6 1770 aaPredicted RBP2.77□□□□□ -1.97
CD44-217ENST00000525348 PIK3C2AO00443 1686 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 PAPPAQ13219 1627 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 ASTN1O14525 1302 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 ADGRA3Q8IWK6 1321 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.76□□□□□ -1.97
CD44-217ENST00000525348 IGHV3-35A0A0C4DH35 117 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 A0A0U1RRA0 63 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 C5orf58C9J3I9 102 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 TSTD3H0UI37 97 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 M0R143 59 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 CYB561D2O14569 222 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 RAB29O14966 203 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 CCL25O15444 150 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 MBTPS2O43462 519 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 ICOSLGO75144 302 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 GGCTO75223 188 aaKnown RBP2.76□□□□□ -1.97
CD44-217ENST00000525348 UPK1BO75841 260 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 CST1P01037 141 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 IFNA17P01571 189 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 CRYBA1P05813 215 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 PPIAL4GP0DN37 164 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 IL1RNP18510 177 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 RAB3BP20337 219 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 IL12AP29459 219 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 SDC4P31431 198 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 SSTR5P35346 364 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 CNN1P51911 297 aaKnown RBP2.76□□□□□ -1.97
CD44-217ENST00000525348 UCNP55089 124 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 ERVPABLB-1P60509 514 aa2.76□□□□□ -1.97
CD44-217ENST00000525348 RRAS2P62070 204 aaPredicted RBP2.76□□□□□ -1.97
CD44-217ENST00000525348 RPL32P62910 135 aaKnown RBP2.76□□□□□ -1.97
CD44-217ENST00000525348 DCDP81605 110 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms