RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 RGS6P49758 472 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 CLDN6P56747 220 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 YWHAEP62258 255 aaKnown RBP1.81□□□□□ -2.12
CD44-215ENST00000525241 MAPRE2Q15555 327 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 SLC9A3R2Q15599 337 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 TSC22D1Q15714 1073 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 LRRC8AQ8IWT6 810 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 ZFP62Q8NB50 900 aaPredicted RBP1.81□□□□□ -2.12
CD44-215ENST00000525241 NAT6Q93015 286 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 DERL3Q96Q80 235 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 OR2V2Q96R30 315 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 STMN4Q9H169 189 aaPredicted RBP1.81□□□□□ -2.12
CD44-215ENST00000525241 CLSTN2Q9H4D0 955 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 VSIRQ9H7M9 311 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 FAM60AQ9NP50 221 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 BAZ2AQ9UIF9 1905 aaKnown RBP1.81□□□□□ -2.12
CD44-215ENST00000525241 NACADO15069 1562 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 SVILO95425 2214 aa1.81□□□□□ -2.12
CD44-215ENST00000525241 TRAV8-6A0A0B4J262 113 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 HSBP1O75506 76 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 KCNK2O95069 426 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 LCA5LO95447 670 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 SLC35G6P0C7Q6 338 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 MTPNP58546 118 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 SLC35A1P78382 337 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 ATP5G2Q06055 141 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 ADIGQ0VDE8 80 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 FBXL19-AS1Q494R0 122 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 TPRG1LQ5T0D9 272 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 AMMECR1LQ6DCA0 310 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 ANGPTL8Q6UXH0 198 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 SLC7A5P1Q8MH63 180 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 OR4D6Q8NGJ1 314 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 OR10Z1Q8NGY1 313 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 GPX8Q8TED1 209 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 ITLN2Q8WWU7 325 aaPredicted RBP1.8□□□□□ -2.12
CD44-215ENST00000525241 YIPF6Q96EC8 236 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 Q96MT0 163 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 GABRG3Q99928 467 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 ZNF649Q9BS31 505 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 DUSP21Q9H596 190 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 C8orf33Q9H7E9 229 aaPredicted RBP1.8□□□□□ -2.12
CD44-215ENST00000525241 INIPQ9NRY2 104 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 ASF1BQ9NVP2 202 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 ADA2Q9NZK5 511 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 ENPP4Q9Y6X5 453 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 ELP1O95163 1332 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 TRIOBPQ9H2D6 2365 aa1.8□□□□□ -2.12
CD44-215ENST00000525241 THADAQ6YHU6 1953 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 C15orf65H3BRN8 121 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 PTTG1O95997 202 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 ARL2P36404 184 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 PAFAH1B2P68402 229 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 LINC00303Q3SY05 128 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 PYDC2Q56P42 97 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 LDLRAD2Q5SZI1 272 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 PLCXD3Q63HM9 321 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 ZNF660Q6AZW8 331 aaPredicted RBP1.79□□□□□ -2.12
CD44-215ENST00000525241 ZNF470Q6ECI4 717 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 OR8K3Q8NH51 312 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 FAM57AQ8TBR7 257 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 YIPF5Q969M3 257 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 PEBP4Q96S96 227 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 OR2S2Q9NQN1 319 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 MMACHCQ9Y4U1 282 aa1.79□□□□□ -2.12
CD44-215ENST00000525241 NLRC5Q86WI3 1866 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 ZNF878C9JN71 531 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 TRDMT1O14717 391 aaKnown RBP1.78□□□□□ -2.12
CD44-215ENST00000525241 AKR7A2O43488 359 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 SEC11BP0C7V7 166 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 TGFBR2P37173 567 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 RAB11AP62491 216 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 FMODQ06828 376 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 RAB11BQ15907 218 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 MRPL2Q5T653 305 aaKnown RBP1.78□□□□□ -2.12
CD44-215ENST00000525241 CYB561A3Q8NBI2 242 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 TMEM234Q8WY98 164 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 RBPMSQ93062 196 aaKnown RBP1.78□□□□□ -2.12
CD44-215ENST00000525241 ISG20Q96AZ6 181 aaKnown RBP1.78□□□□□ -2.12
CD44-215ENST00000525241 API5Q9BZZ5 524 aaKnown RBP1.78□□□□□ -2.12
CD44-215ENST00000525241 IQCGQ9H095 443 aaKnown RBP1.78□□□□□ -2.12
CD44-215ENST00000525241 RDH14Q9HBH5 336 aa1.78□□□□□ -2.12
CD44-215ENST00000525241 BRCA1P38398 1863 aaKnown RBP1.77□□□□□ -2.13
CD44-215ENST00000525241 NPHP4O75161 1426 aaPredicted RBP1.77□□□□□ -2.13
CD44-215ENST00000525241 PLEKHG2Q9H7P9 1386 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 TRAV8-4A0A0B4J246 113 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 IGHV2OR16-5A0A0B4J2B6 119 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 J3QRE1 110 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 J3QT63 122 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 SMC2O95347 1197 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 CPSF4O95639 269 aaKnown RBP1.77□□□□□ -2.13
CD44-215ENST00000525241 P01737 135 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 KLK1P06870 262 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 PAX6P26367 422 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 TEAD1P28347 426 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 GABRR2P28476 465 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 CLDN8P56748 225 aa1.77□□□□□ -2.13
CD44-215ENST00000525241 KLF3P57682 345 aaPredicted RBP1.77□□□□□ -2.13
CD44-215ENST00000525241 TRDNQ13061 729 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms