RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SLC27A4Q6P1M0 643 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 PLBD1Q6P4A8 553 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 XKRXQ6PP77 449 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 IZUMO2Q6UXV1 221 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 Q75L30 129 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 HIST3H2AQ7L7L0 130 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 BHLHA15Q7RTS1 189 aaPredicted RBP2.48□□□□□ -2.01
CSDE1-208ENST00000524652 SSX6Q7RTT6 188 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 LINC00346Q8IVM7 164 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 MCEMP1Q8IX19 187 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 SKA3Q8IX90 412 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 TIGD4Q8IY51 512 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF100Q8IYN0 542 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 CDK20Q8IZL9 346 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 UBE2J2Q8N2K1 259 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 GPR137CQ8N3F9 429 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 LRRC18Q8N456 261 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 SLC22A24Q8N4F4 322 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 TCEANCQ8N8B7 351 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 OR2T33Q8NG76 320 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 OR52L1Q8NGH7 329 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 OR52E2Q8NGJ4 325 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 OR10S1Q8NGN2 331 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 OR6N1Q8NGY5 312 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 OR52N5Q8NH56 324 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 CNIH3Q8TBE1 160 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 FAM81AQ8TBF8 368 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 TEX47Q8TBZ9 253 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 CA5BP1Q8WTZ4 195 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 SGCDQ92629 289 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 BCL2L2Q92843 193 aaPredicted RBP2.48□□□□□ -2.01
CSDE1-208ENST00000524652 HIST1H2ACQ93077 130 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 RNASE6Q93091 150 aaKnown RBP2.48□□□□□ -2.01
CSDE1-208ENST00000524652 S100PBPQ96BU1 408 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 TMEM68Q96MH6 324 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 MUS81Q96NY9 551 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 WFIKKN1Q96NZ8 548 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 IL4I1Q96RQ9 567 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 AMELYQ99218 206 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 SH3GL3Q99963 347 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF649Q9BS31 505 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 MCRIP2Q9BUT9 160 aaKnown RBP2.48□□□□□ -2.01
CSDE1-208ENST00000524652 ALG12Q9BV10 488 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF416Q9BWM5 594 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 C1QTNF6Q9BXI9 259 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 ULBP2Q9BZM5 246 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 RACGAP1Q9H0H5 632 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 PIGMQ9H3S5 423 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 WDR76Q9H967 626 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 MARCH7Q9H992 704 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 POLE4Q9NR33 117 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 SLC17A5Q9NRA2 495 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 TMEM38BQ9NVV0 291 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 SMPD3Q9NY59 655 aaPredicted RBP2.48□□□□□ -2.01
CSDE1-208ENST00000524652 B3GNT2Q9NY97 397 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 TAS2R16Q9NYV7 291 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 TVP23BQ9NYZ1 205 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 COQ3Q9NZJ6 369 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 CACNG5Q9UF02 275 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 OR14J1Q9UGF5 321 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 COPS3Q9UNS2 423 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 KLHDC2Q9Y2U9 406 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 SLC25A15Q9Y619 301 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 LHFPL6Q9Y693 200 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 COMMD3-BMI1R4GMX3 469 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 ARHGAP32A7KAX9 2087 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 USF3Q68DE3 2245 aa2.48□□□□□ -2.01
CSDE1-208ENST00000524652 PRRC2AP48634 2157 aaKnown RBP2.47□□□□□ -2.01
CSDE1-208ENST00000524652 ARID1AO14497 2285 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 ARPC4-TTLL3A0A0A6YYG9 625 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 IGHV1-18A0A0C4DH31 117 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 MEIOCA2RUB1 952 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 DPRXA6NFQ7 191 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 A6NIZ1 184 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 OR5H1A6NKK0 313 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 DEFB108AA8MXU0 73 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 J3QRE1 110 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 XKRYO14609 159 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 MAGEB4O15481 346 aaPredicted RBP2.47□□□□□ -2.01
CSDE1-208ENST00000524652 TLX2O43763 284 aaPredicted RBP2.47□□□□□ -2.01
CSDE1-208ENST00000524652 IDH3BO43837 385 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 ENTPD6O75354 484 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 KHDRBS3O75525 346 aaKnown RBP2.47□□□□□ -2.01
CSDE1-208ENST00000524652 GLCEO94923 617 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 CLPTM1O96005 669 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 IGKV3-15P01624 115 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 HLA-HP01893 362 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 MRPL3P09001 348 aaKnown RBP2.47□□□□□ -2.01
CSDE1-208ENST00000524652 CCL2P13500 99 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF14P17017 642 aaPredicted RBP2.47□□□□□ -2.01
CSDE1-208ENST00000524652 ZNF32P17041 273 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 FMO3P31513 532 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 VHLP40337 213 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 NAA10P41227 235 aaPredicted RBP2.47□□□□□ -2.01
CSDE1-208ENST00000524652 SLC15A1P46059 708 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 SLC25A1P53007 311 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 RAP1BP61224 184 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 RAP1AP62834 184 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 HIST1H3AP68431 136 aa2.47□□□□□ -2.01
CSDE1-208ENST00000524652 MRPS34P82930 218 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms