RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 MTCP1P56278 107 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 ZP1P60852 638 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 MZT1Q08AG7 82 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 Q6ZR03 302 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 OR4D6Q8NGJ1 314 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 OR8S1Q8NH09 359 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 ZNF671Q8TAW3 534 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 LGALS14Q8TCE9 139 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 SLC25A28Q96A46 364 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 WDFY2Q96P53 400 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 GPER1Q99527 375 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 DHRS9Q9BPW9 319 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 C6orf62Q9GZU0 229 aaPredicted RBP11.13□□□□□ -0.63
CPNE3-205ENST00000522240 FGF23Q9GZV9 251 aaPredicted RBP11.13□□□□□ -0.63
CPNE3-205ENST00000522240 PLK3Q9H4B4 646 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 PPP1R3EQ9H7J1 279 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 CNTD2Q9H8S5 307 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 LIN7BQ9HAP6 207 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 TAAR3PQ9P1P4 343 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 MYEF2Q9P2K5 600 aaKnown RBP11.13□□□□□ -0.63
CPNE3-205ENST00000522240 SPATA2Q9UM82 520 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 PEX16Q9Y5Y5 336 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 PLCE1Q9P212 2302 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 CACNA1DQ01668 2161 aa11.13□□□□□ -0.63
CPNE3-205ENST00000522240 IGKV1-27A0A075B6S5 117 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 LOC100289279A0A1B0GTE1 492 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 FAM230AA0A1W2PPH8 454 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 LRP5LA4QPB2 252 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 BPNT1O95861 308 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 PLAUP00749 431 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 ADH4P08319 380 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 NAT2P11245 290 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 SNRPBP14678 240 aaKnown RBP11.12□□□□□ -0.63
CPNE3-205ENST00000522240 APOBEC3AP31941 199 aaPredicted RBP11.12□□□□□ -0.63
CPNE3-205ENST00000522240 OR3A4PP47883 348 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 NKPD1Q17RQ9 610 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 ZNF573Q86YE8 665 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 ZSCAN4Q8NAM6 433 aaPredicted RBP11.12□□□□□ -0.63
CPNE3-205ENST00000522240 OR6Q1Q8NGQ2 317 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 LILRB1Q8NHL6 650 aaPredicted RBP11.12□□□□□ -0.63
CPNE3-205ENST00000522240 TBC1D15Q8TC07 691 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 DVL3Q92997 716 aaPredicted RBP11.12□□□□□ -0.63
CPNE3-205ENST00000522240 FAM3DQ96BQ1 224 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 RNF170Q96K19 258 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 CMTM3Q96MX0 182 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 SPACA5Q96QH8 159 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 DIRC2Q96SL1 478 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 CXXC4Q9H2H0 198 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 C14orf119Q9NWQ9 140 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 NKIRAS2Q9NYR9 191 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 FBLN5Q9UBX5 448 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 OR5V1Q9UGF6 321 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 FBXO9Q9UK97 447 aaPredicted RBP11.12□□□□□ -0.63
CPNE3-205ENST00000522240 ADAM30Q9UKF2 790 aa11.12□□□□□ -0.63
CPNE3-205ENST00000522240 MRPS28Q9Y2Q9 187 aaKnown RBP11.12□□□□□ -0.63
CPNE3-205ENST00000522240 ADGRG4Q8IZF6 3080 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 ZSCAN5BA6NJL1 495 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 A6NNC1 897 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 ZNF732B4DXR9 585 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 B9A039 149 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
CPNE3-205ENST00000522240 PAHP00439 452 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 ARSBP15848 533 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 MPZP25189 248 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 S100A5P33763 92 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 SERPINF1P36955 418 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 CD200P41217 278 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 PTGFRP43088 359 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 POU3F4P49335 361 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 ZNF81P51508 661 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 GPM6AP51674 278 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 CLDN12P56749 244 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 LSAMPQ13449 338 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 P2RY14Q15391 338 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 FAM76BQ5HYJ3 339 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 AWAT2Q6E213 333 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 OR2W3Q7Z3T1 314 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 SAXO1Q8IYX7 474 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 CELF2-AS1Q8N7Q2 184 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 PXT1Q8NFP0 134 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 OR10AD1Q8NGE0 317 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 OR51D1Q8NGF3 324 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 TNFAIP8L1Q8WVP5 186 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 HPS1Q92902 700 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 PTX4Q96A99 478 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 RFT1Q96AA3 541 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 TSC22D3Q99576 134 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 PKIBQ9C010 78 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 MSL2Q9HCI7 577 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 CISD1Q9NZ45 108 aaKnown RBP11.11□□□□□ -0.63
CPNE3-205ENST00000522240 IL36GQ9NZH8 169 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 COMMD3Q9UBI1 195 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 ZDHHC8Q9ULC8 765 aa11.11□□□□□ -0.63
CPNE3-205ENST00000522240 A0A0B4J203 849 aa11.1□□□□□ -0.63
CPNE3-205ENST00000522240 J3QT63 122 aa11.1□□□□□ -0.63
CPNE3-205ENST00000522240 M0R233 179 aa11.1□□□□□ -0.63
CPNE3-205ENST00000522240 HS3ST1O14792 307 aa11.1□□□□□ -0.63
CPNE3-205ENST00000522240 LDLRAD4O15165 306 aa11.1□□□□□ -0.63
CPNE3-205ENST00000522240 RGS5O15539 181 aa11.1□□□□□ -0.63
CPNE3-205ENST00000522240 RAB6AP20340 208 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms