RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 MED30Q96HR3 178 aa7.89□□□□□ -1.15
CLK4-209ENST00000521621 TBX5Q99593 518 aa7.89□□□□□ -1.15
CLK4-209ENST00000521621 ISYNA1Q9NPH2 558 aa7.89□□□□□ -1.15
CLK4-209ENST00000521621 HIF1ANQ9NWT6 349 aa7.89□□□□□ -1.15
CLK4-209ENST00000521621 BABAM2Q9NXR7 383 aa7.89□□□□□ -1.15
CLK4-209ENST00000521621 ZNF222Q9UK12 451 aa7.89□□□□□ -1.15
CLK4-209ENST00000521621 SLC7A11Q9UPY5 501 aa7.89□□□□□ -1.15
CLK4-209ENST00000521621 ZNF732B4DXR9 585 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 FAHP16930 419 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 ATF1P18846 271 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 ZFP36P26651 326 aaKnown RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 PITPNBP48739 271 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 CAV3P56539 151 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 GPR50Q13585 617 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 MICBQ29980 383 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 WDR25Q64LD2 544 aaPredicted RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 ZNF788Q6ZQV5 615 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 LHFPL2Q6ZUX7 228 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 ZSCAN4Q8NAM6 433 aaPredicted RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 ZFAND2BQ8WV99 257 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 PPP1R14AQ96A00 147 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 FAM71F1Q96KD3 344 aaPredicted RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 NRIP2Q9BQI9 281 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 COMMD4Q9H0A8 199 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 FAM234AQ9H0X4 552 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 OPN4Q9UHM6 478 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 AKAP6Q13023 2319 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 MAGEB4O15481 346 aaPredicted RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 GRPP07492 148 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 RPS2P15880 293 aaKnown RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 MYL12AP19105 171 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 CDK5R1Q15078 307 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 PLCXD3Q63HM9 321 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 MOB3CQ70IA8 216 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 Q8NFD4 153 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 ANGPTL6Q8NI99 470 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 CNIH3Q8TBE1 160 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 RAB40AQ8WXH6 277 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 UPRTQ96BW1 309 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 CPNE2Q96FN4 548 aaPredicted RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 BEX2Q9BXY8 128 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 PCDHGB5Q9Y5G0 923 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 CELSR1Q9NYQ6 3014 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 TRBV5-5A0A0J9YX44 114 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 J3QLW9 94 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 ENSAO43768 121 aaKnown RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 RPP14O95059 124 aaKnown RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 ATP6V1G2O95670 118 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 ZNF19P17023 458 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 EGR1P18146 543 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 ETV1P50549 477 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 BMXP51813 675 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 IRF3Q14653 427 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 GFOD2Q3B7J2 385 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 C6orf141Q5SZD1 244 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 DMKNQ6E0U4 476 aaPredicted RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 SLC36A1Q7Z2H8 476 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 DEFB108BQ8NET1 73 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 OR5AK2Q8NH90 309 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 SMIM19Q96E16 107 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 PRDM13Q9H4Q3 707 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 DUSP21Q9H596 190 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 ZMAT3Q9HA38 289 aaKnown RBP7.88□□□□□ -1.15
CLK4-209ENST00000521621 N6AMT1Q9Y5N5 214 aa7.88□□□□□ -1.15
CLK4-209ENST00000521621 ISPDA4D126 451 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 TRAPPC2LH3BP13 241 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 CDIPTO14735 213 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 SIGLEC5O15389 551 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 KNG1P01042 644 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 CDK1P06493 297 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 GPM6AP51674 278 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 GNB2P62879 340 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 UBE2V2Q15819 145 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 SMN1Q16637 294 aaKnown RBP7.87□□□□□ -1.15
CLK4-209ENST00000521621 LRRC36Q1X8D7 754 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 YIF1BQ5BJH7 314 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 DCAF12L2Q5VW00 463 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 ASCL4Q6XD76 172 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 LHFPL3Q86UP9 236 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 SERPINA12Q8IW75 414 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 NANOGP1Q8N7R0 232 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 MYDGFQ969H8 173 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 ISG20L2Q9H9L3 353 aaKnown RBP7.87□□□□□ -1.15
CLK4-209ENST00000521621 PLEKHA1Q9HB21 404 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 CHCHD3Q9NX63 227 aaKnown RBP7.87□□□□□ -1.15
CLK4-209ENST00000521621 NLKQ9UBE8 527 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 ABCA2Q9BZC7 2435 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 TRBV23-1A0A0A0MS06 115 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 INMTO95050 263 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 APOL3O95236 402 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 SRD5A1P18405 259 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 FSTP19883 344 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 ATP1B3P54709 279 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 SMIM21Q3B7S5 101 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 METAP1DQ6UB28 335 aaPredicted RBP7.87□□□□□ -1.15
CLK4-209ENST00000521621 BTNL3Q6UXE8 466 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 ACP7Q6ZNF0 438 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 COMMD2Q86X83 199 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 CALHM1Q8IU99 346 aa7.87□□□□□ -1.15
CLK4-209ENST00000521621 MKXQ8IYA7 352 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms