RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 LAMP5Q9UJQ1 280 aa4.15□□□□□ -1.75
CTNNA1-212ENST00000518919 IKZF2Q9UKS7 526 aa4.15□□□□□ -1.75
CTNNA1-212ENST00000518919 WDR87Q6ZQQ6 2873 aa4.15□□□□□ -1.75
CTNNA1-212ENST00000518919 CFAP54Q96N23 3096 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 TRAV8-7A0A075B6U6 113 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 LOC101059948A0A1B0GTJ6 334 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 C5orf51A6NDU8 294 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 A6NIN4 97 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 A6NIZ1 184 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 TMEM212A6NML5 194 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 NPIPA5E9PKD4 350 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 F8VVB4 439 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 F8VWA3 439 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 AIPO00170 330 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ZNF593O00488 134 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 PHYHO14832 338 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 OR2T1O43869 369 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 SLC16A7O60669 478 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 RAMP1O60894 148 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 TRIM3O75382 744 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 SRSF10O75494 262 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ARL6IP5O75915 188 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 STK17BO94768 372 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 MPZL1O95297 269 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 CSRP1P21291 193 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 DPP4P27487 766 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 BTCP35070 178 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 DDOSTP39656 456 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 CDX1P47902 265 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 EIF2B2P49770 351 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 DAP3P51398 398 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 OR2B6P58173 313 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 MLF1P58340 268 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 RAP1BP61224 184 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 RAP1AP62834 184 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 POU3F1Q03052 451 aaPredicted RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 MRPL28Q13084 256 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 SLC17A1Q14916 467 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ANGPT1Q15389 498 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 EXT1Q16394 746 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ZNF239Q16600 458 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 PCK2Q16822 640 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ODF4Q2M2E3 257 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ZNF528Q3MIS6 628 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 Q499Y3 187 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 PHLDA2Q53GA4 152 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 HES5Q5TA89 166 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 AGAP6Q5VW22 663 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 C3orf33Q6P1S2 294 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 LRRN1Q6UXK5 716 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 TIPARPQ7Z3E1 657 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 AKAP14Q86UN6 197 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 KDM8Q8N371 416 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 NOXO1Q8NFA2 376 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 SLC26A10Q8NG04 563 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 OR4K17Q8NGC6 315 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 OR11H4Q8NGC9 324 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 OR51A4Q8NGJ6 313 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 OR52N5Q8NH56 324 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 M1APQ8TC57 530 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 CT55Q8WUE5 264 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ASB17Q8WXJ9 295 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 UPRTQ96BW1 309 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 DDIT4LQ96D03 193 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 NXPE2Q96DL1 559 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 AGAP4Q96P64 663 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ZNF385AQ96PM9 386 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 WACQ9BTA9 647 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ELOVL3Q9HB03 270 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ZNF160Q9HCG1 818 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 MED29Q9NX70 200 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 ABRACLQ9P1F3 81 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 NPIPA1Q9UND3 350 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 SLC22A13Q9Y226 551 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 AK6Q9Y3D8 172 aaKnown RBP4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 CACNA1HO95180 2353 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 PCNX3Q9H6A9 2034 aa4.14□□□□□ -1.75
CTNNA1-212ENST00000518919 KIF26BQ2KJY2 2108 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 AHCTF1Q8WYP5 2266 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 TRABD2BA6NFA1 517 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 IFITM5A6NNB3 132 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 ZNF587BE7ETH6 402 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 G3V3Y1 287 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 H0YC42 278 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 H3BSH0 61 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 GPR171O14626 319 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 TP53I11O14683 189 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 PDCD5O14737 125 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 TFECO14948 347 aaPredicted RBP4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 EEF1E1O43324 174 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 LYRM1O43325 122 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 KHDRBS3O75525 346 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 OR6A2O95222 327 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 CRYABP02511 175 aaKnown RBP4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 OPN1LWP04000 364 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 KLK3P07288 261 aaPredicted RBP4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 TACSTD2P09758 323 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 TRAPPC2P0DI81 140 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 TRAPPC2BP0DI82 140 aa4.13□□□□□ -1.75
CTNNA1-212ENST00000518919 PGA4P0DJD7 388 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms