RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 RIN1Q13671 783 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 CEACAM21Q3KPI0 293 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 FAM27D1Q5T7N8 215 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 HAGHLQ6PII5 290 aaPredicted RBP8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 PRSS57Q6UWY2 283 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 C11orf53Q8IXP5 236 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 SVOPQ8N4V2 548 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 HAVCR2Q8TDQ0 301 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 GPR148Q8TDV2 347 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 LRRC29Q8WV35 223 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 TMEM203Q969S6 136 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 SEH1LQ96EE3 360 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF488Q96MN9 340 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 HIST1H2AAQ96QV6 131 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 MGLLQ99685 303 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 FN3KRPQ9HA64 309 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 MYOZ1Q9NP98 299 aaPredicted RBP8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 C14orf119Q9NWQ9 140 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 WIPI2Q9Y4P8 454 aa8.25□□□□□ -1.09
TOPBP1-209ENST00000513818 ZANQ9Y493 2812 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 TRAV8-7A0A075B6U6 113 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 A0A096LNT2 108 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 TRBV5-5A0A0J9YX44 114 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 PQLC2LA1A4F0 135 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 OR5B21A6NL26 309 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 TMEM178BH3BS89 294 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 PLPP2O43688 288 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 SYNGR1O43759 233 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 RHBDL1O75783 438 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 GATBO75879 557 aaKnown RBP8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 PTBP3O95758 552 aaKnown RBP8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 TFF1P04155 84 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 OCMP0CE72 109 aaPredicted RBP8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF12P17014 697 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 ATF1P18846 271 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 GATA4P43694 442 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 POU3F4P49335 361 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 GNG3P63215 75 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 MRPS11P82912 194 aaKnown RBP8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 BDH1Q02338 343 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 ACSM1Q08AH1 577 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 SSX1Q16384 188 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 YIF1BQ5BJH7 314 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 SFRP4Q6FHJ7 346 aaPredicted RBP8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 WDR82Q6UXN9 313 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 ANGPTL5Q86XS5 388 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 CALHM1Q8IU99 346 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 EGFL6Q8IUX8 553 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 SPERTQ8NA61 448 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 SCCPDHQ8NBX0 429 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 CCDC54Q8NEL0 328 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 DEFB108BQ8NET1 73 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 OR5D18Q8NGL1 313 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 OR11L1Q8NGX0 322 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 TMEM106AQ96A25 262 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 YTHDF1Q9BYJ9 559 aaKnown RBP8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 REG4Q9BYZ8 158 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 OR51I2Q9H344 312 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 ZCCHC4Q9H5U6 513 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 ABCB9Q9NP78 766 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 DLL4Q9NR61 685 aa8.24□□□□□ -1.09
TOPBP1-209ENST00000513818 ABCA2Q9BZC7 2435 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 TMEM238LA0A1B0GVL6 79 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 TMEM210A6NLX4 147 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 NDUFS8O00217 210 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 PIN1P1O15428 100 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 AKR7A2O43488 359 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 SPRY1O43609 319 aaPredicted RBP8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 TNFAIP8O95379 198 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 IGHV2-70P01814 119 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 HCKP08631 526 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 SMIM18P0DKX4 95 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 IRF2P14316 349 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 SLC25A16P16260 332 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 GIFP27352 417 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 HAAOP46952 286 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 DSCR9P59020 149 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 BTG1P62324 171 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 ZMYND11Q15326 602 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 CNN3Q15417 329 aaKnown RBP8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 Q499Y3 187 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 ARMCX4Q5H9R4 360 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 KRT74Q7RTS7 529 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 PHC2Q8IXK0 858 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 PARP16Q8N5Y8 322 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 GCSAMQ8N6F7 178 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 OR5A2Q8NGI9 324 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 CLDND2Q8NHS1 167 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 Q8TCH9 128 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 PP6455Q8WZ26 134 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 BORCS8Q96FH0 119 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 DERL3Q96Q80 235 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 SMR3AQ99954 134 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 TLNRD1Q9H1K6 362 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 WDR13Q9H1Z4 485 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF696Q9H7X3 374 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 NOX4Q9NPH5 578 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 SNTG1Q9NSN8 517 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 RNF7Q9UBF6 113 aa8.23□□□□□ -1.09
TOPBP1-209ENST00000513818 ZNF69Q9UC07 566 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms