RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 IL19Q9UHD0 177 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 PMF1-BGLAPU3KQ54 211 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 V9GY05 133 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 CELSR2Q9HCU4 2923 aa10.63□□□□□ -0.71
PDPN-210ENST00000513143 A0A0G2JK05 382 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 LRP5LA4QPB2 252 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 ZNF93P35789 620 aaPredicted RBP10.62□□□□□ -0.71
PDPN-210ENST00000513143 SRP9P49458 86 aaKnown RBP10.62□□□□□ -0.71
PDPN-210ENST00000513143 OR10A3P58181 314 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 TNFAIP6P98066 277 aaPredicted RBP10.62□□□□□ -0.71
PDPN-210ENST00000513143 ZNF154Q13106 437 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 PCGF3Q3KNV8 242 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 SPRNQ5BIV9 151 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 C1orf100Q5SVJ3 147 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 ZNF787Q6DD87 383 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 CPNE2Q96FN4 548 aaPredicted RBP10.62□□□□□ -0.71
PDPN-210ENST00000513143 MEGF10Q96KG7 1140 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 OR2V2Q96R30 315 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 UQCC2Q9BRT2 126 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 CACNG6Q9BXT2 260 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 TLNRD1Q9H1K6 362 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 TPK1Q9H3S4 243 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 DYSFO75923 2080 aa10.62□□□□□ -0.71
PDPN-210ENST00000513143 SMIM30A4D0T7 59 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 NOTOA8MTQ0 251 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 H7C417 338 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 OVOL3O00110 214 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 NCR1O76036 304 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 CFPP27918 469 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 GATA4P43694 442 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 CAV3P56539 151 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 ZP1P60852 638 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 RIN1Q13671 783 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 ANGPTL5Q86XS5 388 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 ZNF573Q86YE8 665 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 CALHM1Q8IU99 346 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 C11orf53Q8IXP5 236 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 JAGN1Q8N5M9 183 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 DYNC2LI1Q8TCX1 351 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 ITLN1Q8WWA0 313 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 RFT1Q96AA3 541 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 SLC25A46Q96AG3 418 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 SORCS2Q96PQ0 1159 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 VRK1Q99986 396 aaPredicted RBP10.61□□□□□ -0.71
PDPN-210ENST00000513143 CNTD2Q9H8S5 307 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 TANC2Q9HCD6 1990 aa10.61□□□□□ -0.71
PDPN-210ENST00000513143 IFITM5A6NNB3 132 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 J3QT63 122 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 AIPO00170 330 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 SLC17A2O00624 439 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 TMEM127O75204 238 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 GRPP07492 148 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 MPZP25189 248 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 PTGFRP43088 359 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 HAAOP46952 286 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 CCL8P80075 99 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 PDZK1IP1Q13113 114 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 TESK1Q15569 626 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 MPPED2Q15777 294 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 PRAMEF6Q5VXH4 476 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 FAM166AQ6J272 317 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 SFXN4Q6P4A7 337 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 CROCCP3Q8IVE0 287 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 PNLDC1Q8NA58 520 aaKnown RBP10.6□□□□□ -0.71
PDPN-210ENST00000513143 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 OR4D6Q8NGJ1 314 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 AQP3Q92482 292 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 ERGIC1Q969X5 290 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 GPER1Q99527 375 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 NKX3-1Q99801 234 aaPredicted RBP10.6□□□□□ -0.71
PDPN-210ENST00000513143 BARHL1Q9BZE3 327 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 PKIBQ9C010 78 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 EGLN1Q9GZT9 426 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 RAB1BQ9H0U4 201 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 DECR2Q9NUI1 292 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 FBN2P35556 2912 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 USF3Q68DE3 2245 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 CENPEQ02224 2701 aa10.6□□□□□ -0.71
PDPN-210ENST00000513143 IGHV3-64DA0A0J9YX35 117 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 TPD52L2O43399 206 aaKnown RBP10.59□□□□□ -0.71
PDPN-210ENST00000513143 TMEM225BP0DP42 221 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 TNFRSF1AP19438 455 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 HTR2CP28335 458 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 OR3A4PP47883 348 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 RORCP51449 518 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 KRTAP10-9P60411 292 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 IL24Q13007 206 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 HNRNPA0Q13151 305 aaKnown RBP10.59□□□□□ -0.71
PDPN-210ENST00000513143 HAGHLQ6PII5 290 aaPredicted RBP10.59□□□□□ -0.71
PDPN-210ENST00000513143 ASCL4Q6XD76 172 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 SAXO1Q8IYX7 474 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 ZSCAN4Q8NAM6 433 aaPredicted RBP10.59□□□□□ -0.71
PDPN-210ENST00000513143 OR5D18Q8NGL1 313 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 OR6M1Q8NGM8 313 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 NEU4Q8WWR8 484 aaPredicted RBP10.59□□□□□ -0.71
PDPN-210ENST00000513143 SLC25A28Q96A46 364 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 CCL19Q99731 98 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 LIME1Q9H400 295 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 FN3KRPQ9HA64 309 aa10.59□□□□□ -0.71
PDPN-210ENST00000513143 SAP30LQ9HAJ7 183 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms