RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 C1QL2Q7Z5L3 287 aa13.25□□□□□ -0.29
DDX41-214ENST00000512334 OR5T2Q8NGG2 359 aa13.25□□□□□ -0.29
DDX41-214ENST00000512334 ZNF671Q8TAW3 534 aa13.25□□□□□ -0.29
DDX41-214ENST00000512334 NANPQ8TBE9 248 aa13.25□□□□□ -0.29
DDX41-214ENST00000512334 TRMT10AQ8TBZ6 339 aaKnown RBP13.25□□□□□ -0.29
DDX41-214ENST00000512334 RNF166Q96A37 237 aaPredicted RBP13.25□□□□□ -0.29
DDX41-214ENST00000512334 CCL13Q99616 98 aa13.25□□□□□ -0.29
DDX41-214ENST00000512334 WDR13Q9H1Z4 485 aa13.25□□□□□ -0.29
DDX41-214ENST00000512334 RASSF4Q9H2L5 321 aa13.25□□□□□ -0.29
DDX41-214ENST00000512334 OCEL1Q9H607 264 aa13.25□□□□□ -0.29
DDX41-214ENST00000512334 ISG20L2Q9H9L3 353 aaKnown RBP13.25□□□□□ -0.29
DDX41-214ENST00000512334 MRPS18AQ9NVS2 196 aaKnown RBP13.25□□□□□ -0.29
DDX41-214ENST00000512334 OPN4Q9UHM6 478 aa13.25□□□□□ -0.29
DDX41-214ENST00000512334 IGHV2-70DA0A0C4DH43 119 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.24□□□□□ -0.29
DDX41-214ENST00000512334 TNFRSF13BO14836 293 aaPredicted RBP13.24□□□□□ -0.29
DDX41-214ENST00000512334 HAAOP46952 286 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 IL18R1Q13478 541 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 ALKBH1Q13686 389 aaKnown RBP13.24□□□□□ -0.29
DDX41-214ENST00000512334 ARMCX4Q5H9R4 360 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 FDX2Q6P4F2 183 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 ZNF573Q86YE8 665 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 C8orf59Q8N0T1 100 aaPredicted RBP13.24□□□□□ -0.29
DDX41-214ENST00000512334 SYS1Q8N2H4 156 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 NPRL2Q8WTW4 380 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 RAB40AQ8WXH6 277 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 AQP3Q92482 292 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 C12orf43Q96C57 262 aaKnown RBP13.24□□□□□ -0.29
DDX41-214ENST00000512334 NUDT16L1Q9BRJ7 211 aaKnown RBP13.24□□□□□ -0.29
DDX41-214ENST00000512334 SMURF1Q9HCE7 757 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 SLC7A11Q9UPY5 501 aa13.24□□□□□ -0.29
DDX41-214ENST00000512334 CUBNO60494 3623 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 FAM230AA0A1W2PPH8 454 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 PQLC2LA1A4F0 135 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 IRGMA1A4Y4 181 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 NKX6-3A6NJ46 265 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 H0YAE9 185 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 DVL1O14640 695 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 GATBO75879 557 aaKnown RBP13.23□□□□□ -0.29
DDX41-214ENST00000512334 SERPINA3P01011 423 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 GNAO1P09471 354 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 ZNF20P17024 532 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 CCR9P51686 369 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 GBX2P52951 348 aaPredicted RBP13.23□□□□□ -0.29
DDX41-214ENST00000512334 IKZF1Q13422 519 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 CD276Q5ZPR3 534 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 SLC36A1Q7Z2H8 476 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 FAM216BQ8N7L0 139 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 ZNF676Q8N7Q3 588 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 ST8SIA4Q92187 359 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 TMIGD2Q96BF3 282 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 FGF20Q9NP95 211 aaPredicted RBP13.23□□□□□ -0.29
DDX41-214ENST00000512334 NLKQ9UBE8 527 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 KAAG1Q9UBP8 84 aa13.23□□□□□ -0.29
DDX41-214ENST00000512334 A0A1B0GW55 424 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 C22orf46C9J442 243 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 H0YHG0 523 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 J3QT63 122 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 SYNGR1O43759 233 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 ENSAO43768 121 aaKnown RBP13.22□□□□□ -0.29
DDX41-214ENST00000512334 ISG15P05161 165 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 DUX4L2P0CJ85 424 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 DUX4L3P0CJ86 424 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 DUX4L4P0CJ87 422 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 DUX4L5P0CJ88 424 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 DUX4L6P0CJ89 424 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 DUX4L7P0CJ90 424 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 MYL12AP19105 171 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 EPHA1P21709 976 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 DCKP27707 260 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 PAX2Q02962 417 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 PAX8Q06710 450 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 MRPL28Q13084 256 aaKnown RBP13.22□□□□□ -0.29
DDX41-214ENST00000512334 UBE2V2Q15819 145 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 STUMQ69YW2 141 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 DUX4L9Q6RFH8 374 aaPredicted RBP13.22□□□□□ -0.29
DDX41-214ENST00000512334 OR13C3Q8NGS6 347 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 FGGYQ96C11 551 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 C10orf35Q96D05 121 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 ZNF649Q9BS31 505 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 CHST5Q9GZS9 411 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 DUX4Q9UBX2 424 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 HHLA2Q9UM44 414 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 POLDIP2Q9Y2S7 368 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 HSPE1-MOB4S4R3N1 261 aa13.22□□□□□ -0.29
DDX41-214ENST00000512334 KIR2DS1A0A191URI9 304 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 OR4C45A6NMZ5 311 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 NDUFB3O43676 98 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 TCF21O43680 179 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 RGS9O75916 674 aaPredicted RBP13.21□□□□□ -0.29
DDX41-214ENST00000512334 TFF1P04155 84 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 CCDC159P0C7I6 412 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 LIMS3P0CW19 117 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 LIMS4P0CW20 117 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 GABRA2P47869 451 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 ETV1P50549 477 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 SRSF2Q01130 221 aaKnown RBP13.21□□□□□ -0.29
DDX41-214ENST00000512334 CNN3Q15417 329 aaKnown RBP13.21□□□□□ -0.29
DDX41-214ENST00000512334 TMPRSS11AQ6ZMR5 421 aa13.21□□□□□ -0.29
DDX41-214ENST00000512334 BTN2A1Q7KYR7 527 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms