RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 LAMP5Q9UJQ1 280 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 COPS3Q9UNS2 423 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 LRP12Q9Y561 859 aa7.13□□□□□ -1.27
PDPN-209ENST00000510906 TRAV38-1A0A0B4J264 116 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 TRAV40A0A0B4J280 105 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 A0A1B0GW55 424 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 ZNF850A8MQ14 1090 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 G3V2T6 193 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.12□□□□□ -1.27
PDPN-209ENST00000510906 ENSAO43768 121 aaKnown RBP7.12□□□□□ -1.27
PDPN-209ENST00000510906 LHBP01229 141 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 DUX4L2P0CJ85 424 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 DUX4L3P0CJ86 424 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 DUX4L4P0CJ87 422 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 DUX4L5P0CJ88 424 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 DUX4L6P0CJ89 424 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 DUX4L7P0CJ90 424 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 SLURP1P55000 103 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 ESRRGP62508 458 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 MZT1Q08AG7 82 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 PRDX4Q13162 271 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 KCNJ8Q15842 424 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 C1orf146Q5VVC0 180 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 SLX4IPQ5VYV7 408 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 DUX4L9Q6RFH8 374 aaPredicted RBP7.12□□□□□ -1.27
PDPN-209ENST00000510906 WDR82Q6UXN9 313 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 RBMS3Q6XE24 437 aaKnown RBP7.12□□□□□ -1.27
PDPN-209ENST00000510906 KRT77Q7Z794 578 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 FGFRL1Q8N441 504 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 GALNT4Q8N4A0 578 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 CSNK2A3Q8NEV1 391 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 MICU1Q9BPX6 476 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 YIPF3Q9GZM5 350 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 FGF23Q9GZV9 251 aaPredicted RBP7.12□□□□□ -1.27
PDPN-209ENST00000510906 MS4A7Q9GZW8 240 aaPredicted RBP7.12□□□□□ -1.27
PDPN-209ENST00000510906 C11orf54Q9H0W9 315 aaPredicted RBP7.12□□□□□ -1.27
PDPN-209ENST00000510906 RGCCQ9H4X1 137 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 NIPAL2Q9H841 368 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 RNPEPL1Q9HAU8 725 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 TRIM36Q9NQ86 728 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 KRT84Q9NSB2 600 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.12□□□□□ -1.27
PDPN-209ENST00000510906 ERVK-18Q9QC07 812 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 DUX4Q9UBX2 424 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 SLC23A1Q9UHI7 598 aa7.12□□□□□ -1.27
PDPN-209ENST00000510906 EPPK1P58107 5090 aaKnown RBP7.11□□□□□ -1.27
PDPN-209ENST00000510906 MDFIC2A0A1B0GVS7 189 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 TMEM89A2RUT3 159 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 DNAJC9-AS1A6NH13 148 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 ANXA2P2A6NMY6 339 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 ZAR1LA6NP61 321 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 CDIPTO14735 213 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 KCNAB3O43448 404 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 PLATP00750 562 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 CST4P01036 141 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 CD1AP06126 327 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 SFTPBP07988 381 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 PPIAL4GP0DN37 164 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 PRTN3P24158 256 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 FASP25445 335 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 CFPP27918 469 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 COMPP49747 757 aaPredicted RBP7.11□□□□□ -1.27
PDPN-209ENST00000510906 NPY4RP50391 375 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 RASSF2P50749 326 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 GMFBP60983 142 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 IL5RAQ01344 420 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 WDR38Q5JTN6 314 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 LCN1P1Q5VSP4 162 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 AADACL4Q5VUY2 407 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 TEX36Q5VZQ5 186 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 KDM4DQ6B0I6 523 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 KCTD18Q6PI47 426 aaPredicted RBP7.11□□□□□ -1.27
PDPN-209ENST00000510906 BRD3OSQ6XYD6 125 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 MEPCEQ7L2J0 689 aaKnown RBP7.11□□□□□ -1.27
PDPN-209ENST00000510906 TCEANCQ8N8B7 351 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 HPSE2Q8WWQ2 592 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 OR5P3Q8WZ94 311 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 PIGCQ92535 297 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 RPL3LQ92901 407 aaKnown RBP7.11□□□□□ -1.27
PDPN-209ENST00000510906 DUS3LQ96G46 650 aaKnown RBP7.11□□□□□ -1.27
PDPN-209ENST00000510906 OR8B4Q96RC9 309 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 CNN2Q99439 309 aaKnown RBP7.11□□□□□ -1.27
PDPN-209ENST00000510906 CCL13Q99616 98 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 PKP2Q99959 881 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 PCGF1Q9BSM1 259 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 RTL8AQ9BWD3 113 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 GABARAPL1Q9H0R8 117 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 TLNRD1Q9H1K6 362 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 FAM206AQ9NX38 181 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 AP4S1Q9Y587 144 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 MPC1Q9Y5U8 109 aa7.11□□□□□ -1.27
PDPN-209ENST00000510906 TMEM269A0A1B0GVZ9 245 aa7.1□□□□□ -1.27
PDPN-209ENST00000510906 SRRM5B3KS81 715 aa7.1□□□□□ -1.27
PDPN-209ENST00000510906 ZNF879B4DU55 563 aa7.1□□□□□ -1.27
PDPN-209ENST00000510906 DVL1O14640 695 aa7.1□□□□□ -1.27
PDPN-209ENST00000510906 MAGEB4O15481 346 aaPredicted RBP7.1□□□□□ -1.27
PDPN-209ENST00000510906 NDUFA2O43678 99 aa7.1□□□□□ -1.27
PDPN-209ENST00000510906 ATP5HO75947 161 aa7.1□□□□□ -1.27
PDPN-209ENST00000510906 TFF1P04155 84 aa7.1□□□□□ -1.27
PDPN-209ENST00000510906 SELLP14151 372 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms