RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 COMMD2Q86X83 199 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 KDF1Q8NAX2 398 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 CCDC54Q8NEL0 328 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 THAP6Q8TBB0 222 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 RAB3CQ96E17 227 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 SCGB3A2Q96PL1 93 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 OCSTAMPQ9BR26 566 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 URM1Q9BTM9 101 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 C1QTNF6Q9BXI9 259 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 TMEM59Q9BXS4 323 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 SLC6A15Q9H2J7 730 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 ASH2LQ9UBL3 628 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 SHPKQ9UHJ6 478 aa14.04□□□□□ -0.16
SQSTM1-213ENST00000510187 A0A0A6YYD4 124 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 LINC01387J3KSC0 135 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 IGLV3-1P01715 115 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 QDPRP09417 244 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 FAM87AP0C7U9 286 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 PRF1P14222 555 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 CDAP32320 146 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 ALDH3B1P43353 468 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 ZNF133P52736 654 aaPredicted RBP14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 CYCSP99999 105 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 FOXL2NBQ6ZUU3 175 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 TERB2Q8NHR7 220 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 LHFPL5Q8TAF8 219 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 DMRTA2Q96SC8 542 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 DEFB127Q9H1M4 99 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 ACKR4Q9NPB9 350 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 ZNF71Q9NQZ8 489 aaPredicted RBP14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 MED12Q93074 2177 aa14.03□□□□□ -0.16
SQSTM1-213ENST00000510187 CACNA1GO43497 2377 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 ZNF814B7Z6K7 855 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 SULT2B1O00204 365 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 CCSO14618 274 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 MPIG6BO95866 241 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 ABOP16442 354 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 STARP49675 285 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 ATP1B3P54709 279 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 ECH1Q13011 328 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 SLC22A6Q4U2R8 563 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 C10orf128Q5T292 105 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 CARD17Q5XLA6 110 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 TFAP2EQ6VUC0 442 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 ZNF283Q8N7M2 679 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 INO80EQ8NBZ0 244 aaPredicted RBP14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 TMEM185AQ8NFB2 350 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 OR14K1Q8NGZ2 314 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 NICN1Q9BSH3 213 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 NMES1Q9C002 83 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 ZDHHC11Q9H8X9 412 aa14.02□□□□□ -0.16
SQSTM1-213ENST00000510187 TRBV6-7A0A0A0MS04 114 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 MFNGO00587 321 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 RER1O15258 196 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 PMP2P02689 132 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 HCKP08631 526 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 VAMP1P23763 118 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 THBS4P35443 961 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 OR3A4PP47883 348 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 LUMP51884 338 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 SMUG1Q53HV7 270 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 TMEM128Q5BJH2 165 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 PLAC9Q5JTB6 97 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 NSUN5P2Q63ZY6 315 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 Q6ZSR3 168 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 TMPPEQ6ZT21 453 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 STPG2Q8N412 459 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 FAM89BQ8N5H3 189 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 PNLDC1Q8NA58 520 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 ADAD2Q8NCV1 583 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 OR10K1Q8NGX5 313 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 FAM71F1Q96KD3 344 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 LDAHQ9H6V9 325 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 FN3KRPQ9HA64 309 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 BARX1Q9HBU1 254 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 GPR160Q9UJ42 338 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 LOC100509620A0A075B734 347 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 A0A0U1RQV5 110 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 TNFSF11O14788 317 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 CRHP06850 196 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 MSR1P21757 451 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 FPR2P25090 351 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 ARL6IP1Q15041 203 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 MICBQ29980 383 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 PLEKHN1Q494U1 663 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 FAM57BQ71RH2 274 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 TMEM17Q86X19 198 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 CCDC36Q8IYA8 594 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 TMEM104Q8NE00 496 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 STOML3Q8TAV4 291 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 TMEM54Q969K7 222 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 C10orf35Q96D05 121 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 MRPS24Q96EL2 167 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 SEC22AQ96IW7 307 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 ARPC5LQ9BPX5 153 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 ZNF319Q9P2F9 582 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 GPR132Q9UNW8 380 aa14.01□□□□□ -0.17
SQSTM1-213ENST00000510187 LIPGQ9Y5X9 500 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms