RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 DCAF12L2Q5VW00 463 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 FBXW5Q969U6 566 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 FAM117AQ9C073 453 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 OR2AT4A6NND4 320 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 K7EM74 188 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 SFTPBP07988 381 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 NAT2P11245 290 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 AKR1C4P17516 323 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 C3P1Q6ZMU1 363 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 CDH24Q86UP0 819 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 C9orf62Q8N4C0 152 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 CASTOR1Q8WTX7 329 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 COL25A1Q9BXS0 654 aaPredicted RBP12.88□□□□□ -0.35
PHF3-209ENST00000509330 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
PHF3-209ENST00000509330 PLEKHJ1Q9NW61 149 aa12.88□□□□□ -0.35
PHF3-209ENST00000509330 CCSO14618 274 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 LILRA1O75019 489 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 OR4E1P0C645 316 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 NPY4RP50391 375 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 TSPAN5P62079 268 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 CNN3Q15417 329 aaKnown RBP12.87□□□□□ -0.35
PHF3-209ENST00000509330 FBXW9Q5XUX1 488 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 ZNF585AQ6P3V2 769 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 MRPL21Q7Z2W9 205 aaKnown RBP12.87□□□□□ -0.35
PHF3-209ENST00000509330 MDP1Q86V88 176 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 MRGPRFQ96AM1 343 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 HYLS1Q96M11 299 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 TAAR6Q96RI8 345 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 FAAP24Q9BTP7 215 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 TRAV17A0A0B4J275 112 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 DISC1C4P0D8 188 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 MFNGO00587 321 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 ZNF35P13682 527 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 CPN1P15169 458 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 AMY2BP19961 511 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 VAMP1P23763 118 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 NBL1P41271 181 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 KRTAP27-1Q3LI81 207 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 MARCH1Q8TCQ1 289 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 C1QTNF5Q9BXJ0 243 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 PECRQ9BY49 303 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 PRR13Q9NZ81 148 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 PLEKHA6Q9Y2H5 1048 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 OR14I1A6ND48 311 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 GEMIN2O14893 280 aaKnown RBP12.87□□□□□ -0.35
PHF3-209ENST00000509330 PDGFAP04085 211 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 CD74P04233 296 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 SERPINA5P05154 406 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 ZNF81P51508 661 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 GPM6AP51674 278 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 H2BFSP57053 126 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 PLP2Q04941 152 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 VWA1Q6PCB0 445 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 ADAD2Q8NCV1 583 aaKnown RBP12.87□□□□□ -0.35
PHF3-209ENST00000509330 METTL9Q9H1A3 318 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 RNF122Q9H9V4 155 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 TMEM165Q9HC07 324 aa12.87□□□□□ -0.35
PHF3-209ENST00000509330 ARHGAP21Q5T5U3 1957 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 NBEAQ8NFP9 2946 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 IGKV1D-8A0A087WSZ0 117 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 ZNF891A8MT65 544 aaPredicted RBP12.86□□□□□ -0.35
PHF3-209ENST00000509330 RPL36A-HNRNPH2H7BZ11 118 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 HLA-AP01891 365 aaKnown RBP12.86□□□□□ -0.35
PHF3-209ENST00000509330 TPOP07202 933 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 MELTFP08582 738 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 UBBP0CG47 229 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 OPRM1P35372 400 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 NPBWR2P48146 333 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 NUBP1P53384 320 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 TMEM53Q6P2H8 277 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 SLC25A26Q70HW3 274 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 FBXL14Q8N1E6 418 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 FTMTQ8N4E7 242 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 SLC23A1Q9UHI7 598 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 SLC7A11Q9UPY5 501 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 ZNF816-ZNF321PA0A0X1KG74 233 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 G3V3Q6 166 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 HSPB6O14558 160 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 CPT2P23786 658 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 IDH3GP51553 393 aaPredicted RBP12.86□□□□□ -0.35
PHF3-209ENST00000509330 GMFBP60983 142 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 SSBP1Q04837 148 aaKnown RBP12.86□□□□□ -0.35
PHF3-209ENST00000509330 FOXF2Q12947 444 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 RFPL4BQ6ZWI9 263 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 CSNK2A3Q8NEV1 391 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 OR1K1Q8NGR3 316 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 OR51F2Q8NH61 342 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 PCNPQ8WW12 178 aaKnown RBP12.86□□□□□ -0.35
PHF3-209ENST00000509330 SPSB1Q96BD6 273 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 PIPOXQ9P0Z9 390 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 FBLN5Q9UBX5 448 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 KCNN3Q9UGI6 736 aa12.86□□□□□ -0.35
PHF3-209ENST00000509330 SMG1Q96Q15 3661 aaKnown RBP12.86□□□□□ -0.35
PHF3-209ENST00000509330 XRCC2O43543 280 aa12.85□□□□□ -0.35
PHF3-209ENST00000509330 HOXD11P31277 338 aaPredicted RBP12.85□□□□□ -0.35
PHF3-209ENST00000509330 WNT5AP41221 380 aa12.85□□□□□ -0.35
PHF3-209ENST00000509330 FN3KRPQ9HA64 309 aa12.85□□□□□ -0.35
PHF3-209ENST00000509330 NOP16Q9Y3C1 178 aaKnown RBP12.85□□□□□ -0.35
PHF3-209ENST00000509330 FAM25EA8MYX2 175 aa12.85□□□□□ -0.35
PHF3-209ENST00000509330 ZNF780AO75290 641 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms