RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 SNTB2Q13425 540 aaKnown RBP6.91□□□□□ -1.3
SCN1A-207ENST00000507401 HIST3H3Q16695 136 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 LBHQ53QV2 105 aaPredicted RBP6.91□□□□□ -1.3
SCN1A-207ENST00000507401 DNLZQ5SXM8 178 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 CARD17Q5XLA6 110 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF813Q6ZN06 617 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 UTS2BQ765I0 119 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 CXXC5Q7LFL8 322 aaKnown RBP6.91□□□□□ -1.3
SCN1A-207ENST00000507401 MDP1Q86V88 176 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 MAPK1IP1LQ8NDC0 245 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 DMBX1Q8NFW5 382 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 OR11H4Q8NGC9 324 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 NEU4Q8WWR8 484 aaPredicted RBP6.91□□□□□ -1.3
SCN1A-207ENST00000507401 RNFT2Q96EX2 444 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 NARS2Q96I59 477 aaKnown RBP6.91□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF75AQ96N20 296 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 NIPSNAP1Q9BPW8 284 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 MRPL13Q9BYD1 178 aaKnown RBP6.91□□□□□ -1.3
SCN1A-207ENST00000507401 ULBP2Q9BZM5 246 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 RAB1BQ9H0U4 201 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 OR51M1Q9H341 326 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 ANKRD19PQ9H560 264 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 NMNAT1Q9HAN9 279 aaPredicted RBP6.91□□□□□ -1.3
SCN1A-207ENST00000507401 BABAM2Q9NXR7 383 aa6.91□□□□□ -1.3
SCN1A-207ENST00000507401 YLPM1P49750 1951 aaKnown RBP6.91□□□□□ -1.3
SCN1A-207ENST00000507401 TRAV1-2A0A0B4J238 106 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF503-AS2A6NEH8 195 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 NPIPB13A6NJU9 1138 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 NPIPB4C9JG80 1138 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 C11orf98E9PRG8 122 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 BLOC1S5-TXNDC5H3BN57 136 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 DHHO43323 396 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 DIRAS1O95057 198 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 HLA-HP01893 362 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 SERPINA5P05154 406 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 CD1AP06126 327 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 FABP1P07148 127 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 H1F0P07305 194 aaKnown RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 ERCC1P07992 297 aaPredicted RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 CELA3BP08861 270 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 OR8G3PP0DMU2 310 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 MGMTP16455 207 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF14P17017 642 aaPredicted RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 PVALBP20472 110 aaPredicted RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 USF1P22415 310 aaPredicted RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 THBS4P35443 961 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 GLRXP35754 106 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 PDLIM4P50479 330 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 CCR9P51686 369 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 AKR1D1P51857 326 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF133P52736 654 aaPredicted RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 EFNB1P98172 346 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 ST3GAL3Q11203 375 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 PIN1Q13526 163 aaPredicted RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 P2RY14Q15391 338 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 TMEM249Q2WGJ8 235 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 HFEQ30201 348 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 Q3ZCU0 254 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 IGSF11Q5DX21 431 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 DHRS7BQ6IAN0 325 aaPredicted RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 LPCAT3Q6P1A2 487 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 HAGHLQ6PII5 290 aaPredicted RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 GSG1LQ6UXU4 331 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 DEF8Q6ZN54 512 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 NLRC3Q7RTR2 1065 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 PRIMA1Q86XR5 153 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 GID4Q8IVV7 300 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 NKAIN4Q8IVV8 208 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 SLC22A24Q8N4F4 322 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 ZNF525Q8N782 197 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 DTX3Q8N9I9 347 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 PXT1Q8NFP0 134 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 GNPDA2Q8TDQ7 276 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 SMIM4Q8WVI0 70 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 TMEM239Q8WW34 195 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 ELMOD3Q96FG2 381 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 MRPL48Q96GC5 212 aaKnown RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 IL4I1Q96RQ9 567 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 FOXB1Q99853 325 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 VRK1Q99986 396 aaPredicted RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 SEC61A2Q9H9S3 476 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 TMEM160Q9NX00 188 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 ASH2LQ9UBL3 628 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 EXOGQ9Y2C4 368 aaKnown RBP6.9□□□□□ -1.3
SCN1A-207ENST00000507401 MED31Q9Y3C7 131 aa6.9□□□□□ -1.3
SCN1A-207ENST00000507401 H3BN98 237 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 SMLR1H3BR10 107 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 GABRPO00591 440 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 PHYHO14832 338 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 GPRIN2O60269 458 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 KHDRBS3O75525 346 aaKnown RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 ATG12O94817 140 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 FARS2O95363 451 aaKnown RBP6.89□□□□□ -1.31
SCN1A-207ENST00000507401 IGHG1P01857 330 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 APOC3P02656 99 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 QDPRP09417 244 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 PGA4P0DJD7 388 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 PGA3P0DJD8 388 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 CD79AP11912 226 aa6.89□□□□□ -1.31
SCN1A-207ENST00000507401 NR2C1P13056 603 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms