RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 RHBDL1O75783 438 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 CFHR2P36980 270 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 FAM166AQ6J272 317 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 NANOGP1Q8N7R0 232 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 ZFP41Q8N8Y5 198 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 TRMT10AQ8TBZ6 339 aaKnown RBP15.2■□□□□ 0.02
NPHP4-210ENST00000506941 NPRL2Q8WTW4 380 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 C10orf35Q96D05 121 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 SEH1LQ96EE3 360 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 COMMD4Q9H0A8 199 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 SCN3BQ9NY72 215 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 PCDHB10Q9UN67 800 aa15.2■□□□□ 0.02
NPHP4-210ENST00000506941 IGKV1-27A0A075B6S5 117 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 IGHV3OR15-7A0A075B7D8 119 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 IGKV1-9A0A0C4DH69 117 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 OOEPA6NGQ2 149 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 SRRM5B3KS81 715 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 MYL12BO14950 172 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 MSMBP08118 114 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 ZNF20P17024 532 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 CRHBPP24387 322 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 WNT4P56705 351 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 RNLSQ5VYX0 342 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 TEX36Q5VZQ5 186 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 DMKNQ6E0U4 476 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-210ENST00000506941 HAGHLQ6PII5 290 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-210ENST00000506941 LYPD2Q6UXB3 125 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 FAM90A1Q86YD7 464 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 OR10Z1Q8NGY1 313 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 PP6455Q8WZ26 134 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 AQP3Q92482 292 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 MYDGFQ969H8 173 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 SMIM19Q96E16 107 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 CDCA4Q9BXL8 241 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 WDR13Q9H1Z4 485 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 DUSP21Q9H596 190 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 TRIM36Q9NQ86 728 aa15.19■□□□□ 0.02
NPHP4-210ENST00000506941 CUBNO60494 3623 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 TNFRSF13BO14836 293 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-210ENST00000506941 AKR7A2O43488 359 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 PLPP2O43688 288 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 SYNGR1O43759 233 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 GATBO75879 557 aaKnown RBP15.18■□□□□ 0.02
NPHP4-210ENST00000506941 WNT2P09544 360 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 RPS2P15880 293 aaKnown RBP15.18■□□□□ 0.02
NPHP4-210ENST00000506941 ZFP36P26651 326 aaKnown RBP15.18■□□□□ 0.02
NPHP4-210ENST00000506941 GMFBP60983 142 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 IRF3Q14653 427 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 DCDC5Q6ZRR9 648 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 UTS2BQ765I0 119 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 CALHM1Q8IU99 346 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 OR51F2Q8NH61 342 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 LSM2Q9Y333 95 aaKnown RBP15.18■□□□□ 0.02
NPHP4-210ENST00000506941 TPRKBQ9Y3C4 175 aa15.18■□□□□ 0.02
NPHP4-210ENST00000506941 C2CD3Q4AC94 2353 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 TRAV38-1A0A0B4J264 116 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 FAM230AA0A1W2PPH8 454 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 KIAA1324LA8MWY0 1029 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-210ENST00000506941 J3QT63 122 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 GYPAP02724 150 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 MT-ND2P03891 347 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 HAAOP46952 286 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 DVL1P1P54792 670 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-210ENST00000506941 LCN2P80188 198 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 ANGPTL5Q86XS5 388 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 ZNF573Q86YE8 665 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 OR13C5Q8NGS8 318 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 TSEN15Q8WW01 171 aaKnown RBP15.17■□□□□ 0.02
NPHP4-210ENST00000506941 TMEM186Q96B77 213 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 PGLYRP3Q96LB9 341 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 TECTBQ96PL2 329 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 CTSZQ9UBR2 303 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 MIOXQ9UGB7 285 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 KCNS2Q9ULS6 477 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 SLC7A11Q9UPY5 501 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 ERGIC3Q9Y282 383 aa15.17■□□□□ 0.02
NPHP4-210ENST00000506941 PNMA8CA0A1B0GUJ8 204 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 PHF1O43189 567 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-210ENST00000506941 DENRO43583 198 aaKnown RBP15.16■□□□□ 0.02
NPHP4-210ENST00000506941 SERPINA3P01011 423 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 ATF1P18846 271 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 MPZP25189 248 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 FUT6P51993 359 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 CNN3Q15417 329 aaKnown RBP15.16■□□□□ 0.02
NPHP4-210ENST00000506941 ASPHD2Q6ICH7 369 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 RNF144BQ7Z419 303 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 GLCCI1Q86VQ1 547 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 PARP16Q8N5Y8 322 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 OR13C9Q8NGT0 318 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 GHSRQ92847 366 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 NEIL1Q96FI4 390 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-210ENST00000506941 ZNF488Q96MN9 340 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 OR5M11Q96RB7 305 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 MND1Q9BWT6 205 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 HIF1ANQ9NWT6 349 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 DHDHQ9UQ10 334 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 ZNF281Q9Y2X9 895 aa15.16■□□□□ 0.02
NPHP4-210ENST00000506941 DSCAML1Q8TD84 2053 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 TRAV20A0A0B4J274 112 aa15.15■□□□□ 0.02
NPHP4-210ENST00000506941 A8MXK9 166 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms