RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 P2RY10O00398 339 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 NCR1O76036 304 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 ECDO95905 644 aaPredicted RBP7.14□□□□□ -1.27
PDGFC-205ENST00000506880 IGHV2-70P01814 119 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 HPXP02790 462 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 OCMP0CE72 109 aaPredicted RBP7.14□□□□□ -1.27
PDGFC-205ENST00000506880 CD37P11049 281 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 FAHP16930 419 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 ATF1P18846 271 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 CELP19835 753 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 CFPP27918 469 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 FGF9P31371 208 aaPredicted RBP7.14□□□□□ -1.27
PDGFC-205ENST00000506880 MAGEB1P43366 347 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 BTG1P62324 171 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 MED22Q15528 200 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 MICBQ29980 383 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 GFOD2Q3B7J2 385 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 SMIM21Q3B7S5 101 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 ALKBH6Q3KRA9 238 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 TMEM255AQ5JRV8 349 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 SYT6Q5T7P8 510 aaPredicted RBP7.14□□□□□ -1.27
PDGFC-205ENST00000506880 OR2G6Q5TZ20 316 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 PLCXD3Q63HM9 321 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 CD200R1LQ6Q8B3 271 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 UNQ9370/PRO34162Q6UXP9 181 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 DCDC5Q6ZRR9 648 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 LINC00596Q86U02 117 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 OR5AS1Q8N127 324 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 BHLHE23Q8NDY6 225 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 Q8NFD4 153 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 TBC1D15Q8TC07 691 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 TSEN15Q8WW01 171 aaKnown RBP7.14□□□□□ -1.27
PDGFC-205ENST00000506880 PIGCQ92535 297 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 NRGNQ92686 78 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 TMEM106AQ96A25 262 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 C18orf12Q96KH6 178 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 OPALINQ96PE5 141 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 TMUB1Q9BVT8 246 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 REG4Q9BYZ8 158 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 SLITRK2Q9H156 845 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 NDUFB11Q9NX14 153 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 IL36GQ9NZH8 169 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 PLA2G2EQ9NZK7 142 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 AASSQ9UDR5 926 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 CLEC2DQ9UHP7 191 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 AKAP9Q99996 3911 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 CR1P17927 2039 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 CSMD1Q96PZ7 3565 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 CELSR1Q9NYQ6 3014 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 A0A096LNT2 108 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 LOC100289279A0A1B0GTE1 492 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 A8MXK9 166 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 B4DSR2 109 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 F5H5P2 479 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 CCRL2O00421 344 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 FOXH1O75593 365 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 LIPFP07098 398 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 UBBP0CG47 229 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 PPIAL4GP0DN37 164 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 JUNBP17275 347 aaPredicted RBP7.13□□□□□ -1.27
PDGFC-205ENST00000506880 IGFBP3P17936 291 aaPredicted RBP7.13□□□□□ -1.27
PDGFC-205ENST00000506880 PSMB10P40306 273 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 EMX1Q04741 257 aaPredicted RBP7.13□□□□□ -1.27
PDGFC-205ENST00000506880 DBPQ10586 325 aaPredicted RBP7.13□□□□□ -1.27
PDGFC-205ENST00000506880 SCGB2A2Q13296 93 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 TSTQ16762 297 aaKnown RBP7.13□□□□□ -1.27
PDGFC-205ENST00000506880 ZNF404Q494X3 552 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 NHLRC3Q5JS37 347 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 SPIN3Q5JUX0 258 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 ELP2Q6IA86 826 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 SLC36A1Q7Z2H8 476 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 SPARTQ8N0X7 666 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 ZNF525Q8N782 197 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 POC1AQ8NBT0 407 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 OR10AD1Q8NGE0 317 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 HPSE2Q8WWQ2 592 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 AQP3Q92482 292 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 CCL17Q92583 94 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 MED30Q96HR3 178 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 Q96MF0 132 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 PDCD1LG2Q9BQ51 273 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 SOX7Q9BT81 388 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 MRI1Q9BV20 369 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 CCDC90BQ9GZT6 254 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 GLS2Q9UI32 602 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 GSTK1Q9Y2Q3 226 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 PPIAL4AQ9Y536 164 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 N6AMT1Q9Y5N5 214 aa7.13□□□□□ -1.27
PDGFC-205ENST00000506880 TRAV1-2A0A0B4J238 106 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 TRAV20A0A0B4J274 112 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 TRDV1A0A1B0GX56 115 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A10PA6NDY2 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A18PA6NE21 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A16PA6NEW6 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 OOEPA6NGQ2 149 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A20PA6NIJ5 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A8PA6NJQ4 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 FAM90A7PA6NKC0 464 aa7.12□□□□□ -1.27
PDGFC-205ENST00000506880 A6NLC8 198 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms