RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 R4GMQ9 66 aa7.48□□□□□ -1.21
PDLIM5-209ENST00000506632 IGKV1D-17A0A075B6S4 117 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 IGHV1-69DA0A0B4J2H0 117 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 SAC3D1A6NKF1 404 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 DHRS7CA6NNS2 312 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 ZNF732B4DXR9 585 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 LOC110117498-PIK3R3F6TDL0 507 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 H3BNX3 289 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 EREGO14944 169 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 SIGLEC5O15389 551 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 NDUFB3O43676 98 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 MTRF1O75570 445 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 CIB2O75838 187 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 IGHV1-69P01742 117 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 TFF1P04155 84 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 ACAA1P09110 424 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 CCL1P22362 96 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 HTR1FP30939 366 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 CAV3P56539 151 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 ACTR3P61158 418 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 DGUOKQ16854 277 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 LRRC10Q5BKY1 277 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 DMRTC1Q5HYR2 192 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 CEP78Q5JTW2 689 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 C16orf87Q6PH81 154 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 METAP1DQ6UB28 335 aaPredicted RBP7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 PLEKHG7Q6ZR37 379 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 THAP5Q7Z6K1 395 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 TMEM86BQ8N661 226 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 KIR3DL3Q8N743 410 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 OR5T2Q8NGG2 359 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 OR51G2Q8NGK0 314 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 OR8J1Q8NGP2 316 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 OR14K1Q8NGZ2 314 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 GATAD2BQ8WXI9 593 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 EME1Q96AY2 570 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 RBM4BQ9BQ04 359 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 ZNF747Q9BV97 191 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 SNTG1Q9NSN8 517 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 NLKQ9UBE8 527 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 DNAJB11Q9UBS4 358 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 ENPP5Q9UJA9 477 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 OR52A1Q9UKL2 312 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 V9GYS6 101 aa7.47□□□□□ -1.21
PDLIM5-209ENST00000506632 A0A1B0GVI7 797 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 A0A1W2PQL4 384 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 NKX6-3A6NJ46 265 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 OR2AT4A6NND4 320 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 DLGAP1O14490 977 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 HOXA3O43365 443 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 NOS1APO75052 506 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 NRASP01111 189 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 ALPLP05186 524 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 MELTFP08582 738 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 OR2T7P0C7T2 308 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 PSG2P11465 335 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 GLRA1P23415 457 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 GMFBP60983 142 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 ISL1P61371 349 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 IL13RA1P78552 427 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 IKZF1Q13422 519 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 TMED1Q13445 227 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 CLVS2Q5SYC1 327 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 BCL2L15Q5TBC7 163 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 PLCXD3Q63HM9 321 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 HAGHLQ6PII5 290 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 LIAT1Q6ZQX7 453 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 C1orf122Q6ZSJ8 110 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 MOB3CQ70IA8 216 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 VMO1Q7Z5L0 202 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 COMMD2Q86X83 199 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 CATSPERDQ86XM0 798 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 LDLRAD3Q86YD5 345 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 Q8N7P7 452 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 POC1AQ8NBT0 407 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 OR2T27Q8NH04 317 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNF671Q8TAW3 534 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 PYDC1Q8WXC3 89 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 TNFRSF14Q92956 283 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 LHX4Q969G2 390 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 RNF166Q96A37 237 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 SDSLQ96GA7 329 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 MED30Q96HR3 178 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 HRASLS5Q96KN8 279 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 RIBC2Q9H4K1 309 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 UNKLQ9H9P5 680 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 ACOXLQ9NUZ1 547 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 RASL12Q9NYN1 266 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 USE1Q9NZ43 259 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 SLC25A10Q9UBX3 287 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 SLC22A13Q9Y226 551 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 MAB21L2Q9Y586 359 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 PCDHGB1Q9Y5G3 927 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 MMP24Q9Y5R2 645 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 SNX5Q9Y5X3 404 aa7.46□□□□□ -1.22
PDLIM5-209ENST00000506632 PQLC2LA1A4F0 135 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 METTL15A6NJ78 407 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 J3QT63 122 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 SYNGR1O43759 233 aa7.45□□□□□ -1.22
PDLIM5-209ENST00000506632 SULT1C4O75897 302 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms