RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 MUC1P15941 1255 aaPredicted RBP6.09□□□□□ -1.43
GYPB-206ENST00000506516 FAHP16930 419 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 GATA3P23771 443 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 THBS2P35442 1172 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 CFHR2P36980 270 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 HSPA13P48723 471 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 TGM4P49221 684 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 GPM6AP51674 278 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 AQP4P55087 323 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 RIPPLY3P57055 190 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 ST3GAL4Q11206 333 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 ZNF154Q13106 437 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 MICBQ29980 383 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 CHRFAM7AQ494W8 412 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 ZNF404Q494X3 552 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 CCDC58Q4VC31 144 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 ESCO2Q56NI9 601 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 CEP78Q5JTW2 689 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 SFRP4Q6FHJ7 346 aaPredicted RBP6.09□□□□□ -1.43
GYPB-206ENST00000506516 DCDC5Q6ZRR9 648 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 ZNF826PQ6ZT77 177 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 ZNF573Q86YE8 665 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 RDH10Q8IZV5 341 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 TEX29Q8N6K0 151 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 DEFB108BQ8NET1 73 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 BPIFB6Q8NFQ5 453 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 OR10Z1Q8NGY1 313 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 LRRC29Q8WV35 223 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 NRG4Q8WWG1 115 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 PP6455Q8WZ26 134 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 GGHQ92820 318 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 TMEM186Q96B77 213 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 PELI1Q96FA3 418 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 TECTBQ96PL2 329 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 TMEM246Q9BRR3 403 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 COMMD4Q9H0A8 199 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 SHARPINQ9H0F6 387 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 TLNRD1Q9H1K6 362 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 PPP1R3EQ9H7J1 279 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 ISG20L2Q9H9L3 353 aaKnown RBP6.09□□□□□ -1.43
GYPB-206ENST00000506516 LPAR2Q9HBW0 351 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 NEK6Q9HC98 313 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 HIF1ANQ9NWT6 349 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 BABAM2Q9NXR7 383 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 SCN3BQ9NY72 215 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 HHLA2Q9UM44 414 aa6.09□□□□□ -1.43
GYPB-206ENST00000506516 CAB39Q9Y376 341 aaPredicted RBP6.09□□□□□ -1.43
GYPB-206ENST00000506516 A0A0G2JMP0 313 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 A0A0X1KG70 313 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 LOC107986453A0A1B0GWG9 222 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 ANKRD61A6NGH8 418 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 TMEM212A6NML5 194 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 CRLF1O75462 422 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 IGLV1-40P01703 118 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 OCM2P0CE71 109 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 OCMP0CE72 109 aaPredicted RBP6.08□□□□□ -1.44
GYPB-206ENST00000506516 LIMS3P0CW19 117 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 LIMS4P0CW20 117 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 RPS2P15880 293 aaKnown RBP6.08□□□□□ -1.44
GYPB-206ENST00000506516 ZNF20P17024 532 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 FSTP19883 344 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 KIR3DL2P43630 455 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 NPY4RP50391 375 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 ETV1P50549 477 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 FUT6P51993 359 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 NANOS3P60323 173 aaKnown RBP6.08□□□□□ -1.44
GYPB-206ENST00000506516 GNB2P62879 340 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 LCN2P80188 198 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 HNRNPA0Q13151 305 aaKnown RBP6.08□□□□□ -1.44
GYPB-206ENST00000506516 NKAPLQ5M9Q1 402 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 FAM201AQ5SY85 155 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 C6orf141Q5SZD1 244 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 FAM120AOSQ5T036 256 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 TMEM42Q69YG0 159 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 FAHD2BQ6P2I3 314 aaPredicted RBP6.08□□□□□ -1.44
GYPB-206ENST00000506516 RPL22L1Q6P5R6 122 aaKnown RBP6.08□□□□□ -1.44
GYPB-206ENST00000506516 WDR82Q6UXN9 313 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 WDR86Q86TI4 376 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 C11orf53Q8IXP5 236 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 GCSAMQ8N6F7 178 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 SCCPDHQ8NBX0 429 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 OR4M2Q8NGB6 313 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 OR8B3Q8NGG8 313 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 OR5AK2Q8NH90 309 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 RNF141Q8WVD5 230 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 HPSE2Q8WWQ2 592 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 RPL3LQ92901 407 aaKnown RBP6.08□□□□□ -1.44
GYPB-206ENST00000506516 MYDGFQ969H8 173 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 FGGYQ96C11 551 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 C12orf43Q96C57 262 aaKnown RBP6.08□□□□□ -1.44
GYPB-206ENST00000506516 NEIL1Q96FI4 390 aaPredicted RBP6.08□□□□□ -1.44
GYPB-206ENST00000506516 FAHD2AQ96GK7 314 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 OR8B2Q96RD0 313 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 ZNF649Q9BS31 505 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 SSBP3Q9BWW4 388 aaPredicted RBP6.08□□□□□ -1.44
GYPB-206ENST00000506516 OR51I2Q9H344 312 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 GPR173Q9NS66 373 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 ERVK-18Q9QC07 812 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 DNAJB11Q9UBS4 358 aa6.08□□□□□ -1.44
GYPB-206ENST00000506516 PSORS1C1Q9UIG5 152 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms