RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SPTA1P02549 2419 aa2.24□□□□□ -2.05
TRAPPC11-205ENST00000506426 LRRK2Q5S007 2527 aa2.24□□□□□ -2.05
TRAPPC11-205ENST00000506426 PTPN13Q12923 2485 aa2.24□□□□□ -2.05
TRAPPC11-205ENST00000506426 ASXL3Q9C0F0 2248 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 CABIN1Q9Y6J0 2220 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 PTPRDP23468 1912 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 TCHHQ07283 1943 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 ADAMTS9Q9P2N4 1935 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 NUMA1Q14980 2115 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 TRAV6A0A075B6T7 132 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 A0A0D9SEW6 157 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 CIB4A0PJX0 185 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 F5H5T6 163 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 KPNA3O00505 521 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 SIVA1O15304 175 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 RAD51BO15315 384 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 RAD51CO43502 376 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 AQP8O94778 261 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 SCELO95171 688 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 TGM6O95932 706 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 CSTAP01040 98 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 IGLV3-27P01718 113 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 UBTFL6P0CB48 400 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 GIMD1P0DJR0 217 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 OR5H8P0DN80 308 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 NR2C1P13056 603 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 ZNF30P17039 623 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 RAB3BP20337 219 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 BMI1P35226 326 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 RFC3P40938 356 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 NMUP48645 174 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 RND2P52198 227 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 NCBP2P52298 156 aaKnown RBP eCLIP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 PSMD4P55036 377 aaKnown RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 WNT4P56705 351 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 SNRPFP62306 86 aaKnown RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 NDPQ00604 133 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 DAZ2Q13117 558 aaKnown RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 UNC119Q13432 240 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 PON3Q15166 354 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 ZNF79Q15937 498 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 DEFB133Q30KQ1 61 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 RNF212Q495C1 297 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 PTPN20Q4JDL3 420 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 TPTE2P1Q5T6R2 138 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 GPR107Q5VW38 600 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 KCTD16Q68DU8 428 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 SPECC1LQ69YQ0 1117 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 GUSBP11Q6P575 273 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 ULK3Q6PHR2 472 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 NPSR1Q6W5P4 371 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 ZNF493Q6ZR52 646 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 FAM183BPQ6ZVS7 135 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 MBOAT2Q6ZWT7 520 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 C6orf120Q7Z4R8 191 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 ARHGAP18Q8N392 663 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 SLC25A45Q8N413 288 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 TMEM104Q8NE00 496 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 OR10J6PQ8NGY7 276 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 OR4S2Q8NH73 311 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 CD300LFQ8TDQ1 290 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 TMEM230Q96A57 120 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 APH1AQ96BI3 265 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 SERPINB11Q96P15 392 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 FOXC2Q99958 501 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 TM6SF2Q9BZW4 377 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 TCEAL2Q9H3H9 227 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 DAZ3Q9NR90 486 aaKnown RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 DDIT4Q9NX09 232 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 ZNF282Q9UDV7 671 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 STOML2Q9UJZ1 356 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 TP53TG3Q9ULZ0 132 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 YARS2Q9Y2Z4 477 aaKnown RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 COMMD3-BMI1R4GMX3 469 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 U3KQA8 63 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 COL5A1P20908 1838 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 PIEZO2Q9H5I5 2752 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 THADAQ6YHU6 1953 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 TLN1Q9Y490 2541 aaKnown RBP2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 KNL1Q8NG31 2342 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 NOTCH2Q04721 2471 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 MGAQ8IWI9 3026 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 CSMD1Q96PZ7 3565 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 ANAPC1Q9H1A4 1944 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 BSNQ9UPA5 3926 aa2.23□□□□□ -2.05
TRAPPC11-205ENST00000506426 UNC79Q9P2D8 2635 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 RELNP78509 3460 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 NUP205Q92621 2012 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 MYH11P35749 1972 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 A0A1B0GUH1 482 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 ZNF99A8MXY4 864 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 C10orf142B7Z368 130 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 J3QKU1 62 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 PLPP1O14494 284 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 CETN3O15182 167 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 RRP8O43159 456 aaKnown RBP2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 TRAF3IP2O43734 574 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 SUPT3HO75486 399 aa2.22□□□□□ -2.05
TRAPPC11-205ENST00000506426 APOEP02649 317 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms