RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 REG3AQ06141 175 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 SLC10A7Q0GE19 358 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 SUMO4Q6EEV6 95 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 Q6ZN92 141 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 OR1N2Q8NGR9 330 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 SRSF12Q8WXF0 261 aaKnown RBP4.23□□□□□ -1.73
NIPBL-204ENST00000504430 DDIT4LQ96D03 193 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 HBEGFQ99075 208 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 RSPO3Q9BXY4 272 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-204ENST00000504430 BOLA2Q9H3K6 86 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 VDAC3Q9Y277 283 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 IGLV1-36A0A0B4J1U3 117 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 CLDN1O95832 211 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 CD38P28907 300 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 PRSS3P35030 304 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 LGALS7P47929 136 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 DLX1P56177 255 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 TAS2R43P59537 309 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 DNAJB13P59910 316 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 TMEM30BQ3MIR4 351 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 CLEC12AQ5QGZ9 265 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 YTHDF3Q7Z739 585 aaKnown RBP4.23□□□□□ -1.73
NIPBL-204ENST00000504430 DAW1Q8N136 415 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 GPD1LQ8N335 351 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 CADM2Q8N3J6 435 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 OR9Q1Q8NGQ5 310 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 GMPPAQ96IJ6 420 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-204ENST00000504430 NODALQ96S42 347 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 CEP152O94986 1710 aa4.23□□□□□ -1.73
NIPBL-204ENST00000504430 A0A0G2JMP0 313 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 TCP10L2B9ZVM9 353 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 G3V2L1 256 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 ZNF593O00488 134 aaPredicted RBP4.22□□□□□ -1.73
NIPBL-204ENST00000504430 IGHV3-9P01782 118 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 ZNF25P17030 456 aaPredicted RBP4.22□□□□□ -1.73
NIPBL-204ENST00000504430 CD200P41217 278 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 SLC35A1P78382 337 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 P2RY6Q15077 328 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 NEDD8Q15843 81 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 CEACAM16Q2WEN9 425 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 TMEM97Q5BJF2 176 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 MRPL55Q7Z7F7 128 aaKnown RBP4.22□□□□□ -1.73
NIPBL-204ENST00000504430 NAA40Q86UY6 237 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 OR4M2Q8NGB6 313 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 TMEM54Q969K7 222 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 GALPQ9UBC7 116 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 VAX2Q9UIW0 290 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 CARHSP1Q9Y2V2 147 aaKnown RBP4.22□□□□□ -1.73
NIPBL-204ENST00000504430 LYRM9A8MSI8 78 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 B4DXG7 233 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 OR10J4P0C629 311 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 TSFMP43897 325 aaKnown RBP4.22□□□□□ -1.73
NIPBL-204ENST00000504430 SNRPD1P62314 119 aaKnown RBP4.22□□□□□ -1.73
NIPBL-204ENST00000504430 ZNF616Q08AN1 781 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 GRK1Q15835 563 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 KLHL12Q53G59 568 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 SAMD13Q5VXD3 122 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 OR52E2Q8NGJ4 325 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 TM4SF18Q96CE8 201 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 POMKQ9H5K3 350 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 TAS2R1Q9NYW7 299 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 INSIG2Q9Y5U4 225 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 SNX10Q9Y5X0 201 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 IGSF23A1L1A6 192 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 RBFOX3A6NFN3 312 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 TXNDC9O14530 226 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 OR5AL1P0C617 328 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 PSMB1P20618 241 aaKnown RBP4.22□□□□□ -1.73
NIPBL-204ENST00000504430 CTRLP40313 264 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 LRRC36Q1X8D7 754 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 TMEM128Q5BJH2 165 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 UNQ9370/PRO34162Q6UXP9 181 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 GSG1LQ6UXU4 331 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 Q6ZPA2 131 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 TMEM150AQ86TG1 271 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 OSR2Q8N2R0 312 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 OR4X1Q8NH49 305 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 DIRAS2Q96HU8 199 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 FAM19A4Q96LR4 140 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 FAM53CQ9NYF3 392 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 KLK11Q9UBX7 282 aa4.22□□□□□ -1.73
NIPBL-204ENST00000504430 ATG2BQ96BY7 2078 aa4.21□□□□□ -1.73
NIPBL-204ENST00000504430 IGLV5-45A0A087WSX0 123 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 SERPINB7O75635 380 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 F2RP25116 425 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 PAX6P26367 422 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 MARK3P27448 753 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 IL12AP29459 219 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 RPL18AQ02543 176 aaKnown RBP4.21□□□□□ -1.74
NIPBL-204ENST00000504430 OR7A5Q15622 319 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 C14orf28Q4W4Y0 310 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 REP15Q6BDI9 236 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 GRINAQ7Z429 371 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 OR4K17Q8NGC6 315 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 C14orf144Q96I85 54 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 MARVELD1Q9BSK0 173 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 CCDC32Q9BV29 185 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 WSB1Q9Y6I7 421 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 COL4A3Q01955 1670 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 A0A0G2JRQ6 117 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms