RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 AKR7A2O43488 359 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 CD5LO43866 347 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 GATBO75879 557 aaKnown RBP16.28■□□□□ 0.2
HDAC4-212ENST00000495497 SERPINA3P01011 423 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 HAAOP46952 286 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 GZMKP49863 264 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 MED22Q15528 200 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 TMEM155Q4W5P6 130 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 HAGHLQ6PII5 290 aaPredicted RBP16.28■□□□□ 0.2
HDAC4-212ENST00000495497 PRSS48Q7RTY5 328 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 ANGPTL5Q86XS5 388 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 PP6455Q8WZ26 134 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 AQP3Q92482 292 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 PGLYRP3Q96LB9 341 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 LPAR2Q9HBW0 351 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 PCDHB10Q9UN67 800 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 SLC7A11Q9UPY5 501 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 ZNF281Q9Y2X9 895 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 ZANQ9Y493 2812 aa16.28■□□□□ 0.2
HDAC4-212ENST00000495497 LGALS8O00214 317 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 SYNGR1O43759 233 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 HEXAP06865 529 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 ATF1P18846 271 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 CELP19835 753 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 TAS2R43P59537 309 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 SEC61A1P61619 476 aaKnown RBP16.27■□□□□ 0.2
HDAC4-212ENST00000495497 ZNF404Q494X3 552 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 LYPD2Q6UXB3 125 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 RNF144BQ7Z419 303 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 BATF2Q8N1L9 274 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 SPICQ8N5J4 248 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 OR13C9Q8NGT0 318 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 GPR148Q8TDV2 347 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 ORAI1Q96D31 301 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 C1orf159Q96HA4 380 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 WDR13Q9H1Z4 485 aa16.27■□□□□ 0.2
HDAC4-212ENST00000495497 PATZ1Q9HBE1 687 aaKnown RBP16.27■□□□□ 0.2
HDAC4-212ENST00000495497 OOEPA6NGQ2 149 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 CEACAM18A8MTB9 384 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 TGFAP01135 160 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 FUT6P51993 359 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 RPS11P62280 158 aaKnown RBP eCLIP16.26■□□□□ 0.19
HDAC4-212ENST00000495497 SPHARQ15513 63 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 UTS2BQ765I0 119 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 CALHM1Q8IU99 346 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 MUC20Q8N307 709 aaPredicted RBP16.26■□□□□ 0.19
HDAC4-212ENST00000495497 OR10Z1Q8NGY1 313 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 BORCS8Q96FH0 119 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 ZNF488Q96MN9 340 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 ZCCHC4Q9H5U6 513 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 YAE1D1Q9NRH1 226 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 BLOC1S6Q9UL45 172 aa16.26■□□□□ 0.19
HDAC4-212ENST00000495497 SRRM5B3KS81 715 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.25■□□□□ 0.19
HDAC4-212ENST00000495497 PLPP2O43688 288 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 INMTO95050 263 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 GYPAP02724 150 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 RPSAP08865 295 aaKnown RBP16.25■□□□□ 0.19
HDAC4-212ENST00000495497 OCM2P0CE71 109 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 AZGP1P25311 298 aaKnown RBP16.25■□□□□ 0.19
HDAC4-212ENST00000495497 CFHR2P36980 270 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 CNN3Q15417 329 aaKnown RBP16.25■□□□□ 0.19
HDAC4-212ENST00000495497 ASPHD2Q6ICH7 369 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 FAM90A1Q86YD7 464 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 ZNF573Q86YE8 665 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 SERPINA12Q8IW75 414 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 LINC01356Q8N9X3 169 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 RAB39BQ96DA2 213 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 SPACA5Q96QH8 159 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 SNTG1Q9NSN8 517 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 TAS2R4Q9NYW5 299 aa16.25■□□□□ 0.19
HDAC4-212ENST00000495497 TEP1Q99973 2627 aaKnown RBP16.25■□□□□ 0.19
HDAC4-212ENST00000495497 F5H0A9 414 aaPredicted RBP16.24■□□□□ 0.19
HDAC4-212ENST00000495497 J3QT63 122 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 PLATP00750 562 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 TFF1P04155 84 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 HSMCR30P0CW71 290 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 RPS2P15880 293 aaKnown RBP16.24■□□□□ 0.19
HDAC4-212ENST00000495497 BDH1Q02338 343 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 ACSM1Q08AH1 577 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 TEX36Q5VZQ5 186 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 PARP16Q8N5Y8 322 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 OR5T2Q8NGG2 359 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 RFT1Q96AA3 541 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 TECTBQ96PL2 329 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 CSPG4Q6UVK1 2322 aa16.24■□□□□ 0.19
HDAC4-212ENST00000495497 YLPM1P49750 1951 aaKnown RBP16.24■□□□□ 0.19
HDAC4-212ENST00000495497 TRAV38-1A0A0B4J264 116 aa16.23■□□□□ 0.19
HDAC4-212ENST00000495497 TRBV5-5A0A0J9YX44 114 aa16.23■□□□□ 0.19
HDAC4-212ENST00000495497 A0A1W2PPK0 400 aa16.23■□□□□ 0.19
HDAC4-212ENST00000495497 TNFRSF13BO14836 293 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-212ENST00000495497 FSTL3O95633 263 aa16.23■□□□□ 0.19
HDAC4-212ENST00000495497 WNT2P09544 360 aa16.23■□□□□ 0.19
HDAC4-212ENST00000495497 OCMP0CE72 109 aaPredicted RBP16.23■□□□□ 0.19
HDAC4-212ENST00000495497 GLRA1P23415 457 aa16.23■□□□□ 0.19
HDAC4-212ENST00000495497 ZFP36P26651 326 aaKnown RBP16.23■□□□□ 0.19
HDAC4-212ENST00000495497 ATP1B3P54709 279 aa16.23■□□□□ 0.19
HDAC4-212ENST00000495497 MTCP1P56278 107 aa16.23■□□□□ 0.19
HDAC4-212ENST00000495497 GABARAPL2P60520 117 aa16.23■□□□□ 0.19
HDAC4-212ENST00000495497 YIF1BQ5BJH7 314 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms