RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 FSTL3O95633 263 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 KRT8P05787 483 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 PPIAL4FP0DN26 164 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 MDH2P40926 338 aaKnown RBP11.09□□□□□ -0.63
ERCC3-209ENST00000494464 PPP5CP53041 499 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 GRB2P62993 217 aaKnown RBP11.09□□□□□ -0.63
ERCC3-209ENST00000494464 HNRNPA0Q13151 305 aaKnown RBP11.09□□□□□ -0.63
ERCC3-209ENST00000494464 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 ZMYND11Q15326 602 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 CCDC190Q86UF4 302 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 LRRC28Q86X40 367 aaPredicted RBP11.09□□□□□ -0.63
ERCC3-209ENST00000494464 MUC20Q8N307 709 aaPredicted RBP11.09□□□□□ -0.63
ERCC3-209ENST00000494464 ZNF454Q8N9F8 522 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 GHSRQ92847 366 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 TTTY10Q9BZA0 68 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 SLC22A4Q9H015 551 aa11.09□□□□□ -0.63
ERCC3-209ENST00000494464 PATZ1Q9HBE1 687 aaKnown RBP11.09□□□□□ -0.63
ERCC3-209ENST00000494464 MRM2Q9UI43 246 aaKnown RBP11.09□□□□□ -0.63
ERCC3-209ENST00000494464 CD300LBA8K4G0 201 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 A8MXK9 166 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 F5H5P2 479 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 XRCC2O43543 280 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 FOXH1O75593 365 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 ZNF12P17014 697 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 ANOS1P23352 680 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 CPT2P23786 658 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 CD200P41217 278 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 PRSS12P56730 875 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 ROM1Q03395 351 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 ZNF92Q03936 586 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 TAF13Q15543 124 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 KRTAP24-1Q3LI83 254 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 YIF1BQ5BJH7 314 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 GLYATL3Q5SZD4 288 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 FAHD2BQ6P2I3 314 aaPredicted RBP11.08□□□□□ -0.64
ERCC3-209ENST00000494464 FDX2Q6P4F2 183 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 DPY19L4Q7Z388 723 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 TPRA1Q86W33 373 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 RNF133Q8WVZ7 376 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 ERGIC1Q969X5 290 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
ERCC3-209ENST00000494464 SPSB4Q96A44 273 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 FAHD2AQ96GK7 314 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 OR8B4Q96RC9 309 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 REPIN1Q9BWE0 567 aaKnown RBP11.08□□□□□ -0.64
ERCC3-209ENST00000494464 TMPRSS13Q9BYE2 586 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 CENPMQ9NSP4 180 aa11.08□□□□□ -0.64
ERCC3-209ENST00000494464 POLR3KQ9Y2Y1 108 aaPredicted RBP11.08□□□□□ -0.64
ERCC3-209ENST00000494464 TRAV1-2A0A0B4J238 106 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 TRBV2A0A0J9YWF9 115 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 SHISA3A0PJX4 238 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 TCF21O43680 179 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 ARL6IP5O75915 188 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 PTBP3O95758 552 aaKnown RBP11.07□□□□□ -0.64
ERCC3-209ENST00000494464 APOC1P02654 83 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 CLEC2LP0C7M8 214 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 MYL9P24844 172 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 PRKXP51817 358 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 MXD1Q05195 221 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 MAB21L1Q13394 359 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 EIF2B1Q14232 305 aaKnown RBP11.07□□□□□ -0.64
ERCC3-209ENST00000494464 DCAF12L2Q5VW00 463 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 C1orf229Q6ZS94 237 aaPredicted RBP11.07□□□□□ -0.64
ERCC3-209ENST00000494464 MOGAT3Q86VF5 341 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 C1orf87Q8N0U7 546 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 OR2AE1Q8NHA4 323 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 Q8TCH9 128 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 ADAT1Q9BUB4 502 aaKnown RBP11.07□□□□□ -0.64
ERCC3-209ENST00000494464 ABHD6Q9BV23 337 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 METTL17Q9H7H0 456 aaPredicted RBP11.07□□□□□ -0.64
ERCC3-209ENST00000494464 MRPL15Q9P015 296 aaKnown RBP11.07□□□□□ -0.64
ERCC3-209ENST00000494464 METRNQ9UJH8 293 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 PCDHB10Q9UN67 800 aa11.07□□□□□ -0.64
ERCC3-209ENST00000494464 C5orf63A6NC05 138 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 ANKRD61A6NGH8 418 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 LRRC30A6NM36 301 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 CEACAM18A8MTB9 384 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 LOC110117498-PIK3R3F6TDL0 507 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 MAGEB4O15481 346 aaPredicted RBP11.06□□□□□ -0.64
ERCC3-209ENST00000494464 AVPP01185 164 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 UCHL1P09936 223 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 SLC2A1P11166 492 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 CALRP27797 417 aaKnown RBP11.06□□□□□ -0.64
ERCC3-209ENST00000494464 HSD11B1P28845 292 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 RBMXP38159 391 aaKnown RBP11.06□□□□□ -0.64
ERCC3-209ENST00000494464 PSMB10P40306 273 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 CX3CR1P49238 355 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 RPS11P62280 158 aaKnown RBP eCLIP11.06□□□□□ -0.64
ERCC3-209ENST00000494464 ALKBH1Q13686 389 aaKnown RBP11.06□□□□□ -0.64
ERCC3-209ENST00000494464 INSL4Q14641 139 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 ACSM3Q53FZ2 586 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 SPANXN2Q5MJ10 180 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 LIPNQ5VXI9 398 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 KCTD18Q6PI47 426 aaPredicted RBP11.06□□□□□ -0.64
ERCC3-209ENST00000494464 UNQ9370/PRO34162Q6UXP9 181 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 C1QL2Q7Z5L3 287 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 CEACAM19Q7Z692 300 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 ZNF679Q8IYX0 411 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 YIPF7Q8N8F6 280 aa11.06□□□□□ -0.64
ERCC3-209ENST00000494464 ACOT12Q8WYK0 555 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms