RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 SRMP19623 302 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 PRKACBP22694 351 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 BDKRB2P30411 391 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 CD200P41217 278 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 FUT6P51993 359 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 ATP5J2P56134 94 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 MTCP1P56278 107 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 GNG3P63215 75 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 TIMM50Q3ZCQ8 353 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 KRT74Q7RTS7 529 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 RNF144BQ7Z419 303 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 ANGPTL5Q86XS5 388 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 DNAAF1Q8NEP3 725 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 ZNF420Q8TAQ5 688 aaPredicted RBP14.55□□□□□ -0.08
LIME1-208ENST00000493265 NEU4Q8WWR8 484 aaPredicted RBP14.55□□□□□ -0.08
LIME1-208ENST00000493265 TECTBQ96PL2 329 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 CENPOQ9BU64 300 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 NAA50Q9GZZ1 169 aaKnown RBP14.55□□□□□ -0.08
LIME1-208ENST00000493265 DLL4Q9NR61 685 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 GSTK1Q9Y2Q3 226 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 CACNG2Q9Y698 323 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 ARFGEF3Q5TH69 2177 aa14.55□□□□□ -0.08
LIME1-208ENST00000493265 ABCA2Q9BZC7 2435 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 IGKV1-27A0A075B6S5 117 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 hCG_1807616A0A1W2PRN6 198 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 PQLC2LA1A4F0 135 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 IGHV4-39P01824 125 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 TNFRSF1AP19438 455 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 FSTP19883 344 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 MYL9P24844 172 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 TGFBR1P36897 503 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 PTH2RP49190 550 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 POU3F4P49335 361 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 RBP2P50120 134 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 EFNA4P52798 201 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 ATP1B3P54709 279 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 DDI2Q5TDH0 399 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 ZNF826PQ6ZT77 177 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 CLVS1Q8IUQ0 354 aaPredicted RBP14.54□□□□□ -0.08
LIME1-208ENST00000493265 BOLLQ8N9W6 283 aaKnown RBP14.54□□□□□ -0.08
LIME1-208ENST00000493265 OR52N4Q8NGI2 321 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 OR5D18Q8NGL1 313 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 SPSB1Q96BD6 273 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 GPER1Q99527 375 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 NEK6Q9HC98 313 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 TMEM138Q9NPI0 162 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 C1orf123Q9NWV4 160 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 FOXJ3Q9UPW0 622 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 PPP1R3CQ9UQK1 317 aa14.54□□□□□ -0.08
LIME1-208ENST00000493265 IGHV1-69-2A0A0G2JMI3 117 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 SMIM30A4D0T7 59 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 CDIPTO14735 213 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 SSX4O60224 188 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 F12P00748 615 aaPredicted RBP14.53□□□□□ -0.08
LIME1-208ENST00000493265 DAOP14920 347 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 GALP22466 123 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 COL8A2P25067 703 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 HAAOP46952 286 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 GMFBP60983 142 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 ZNF154Q13106 437 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 ZNF529Q6P280 563 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 HAGHLQ6PII5 290 aaPredicted RBP14.53□□□□□ -0.08
LIME1-208ENST00000493265 LHFPL2Q6ZUX7 228 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 Q71RC1 249 aaPredicted RBP14.53□□□□□ -0.08
LIME1-208ENST00000493265 BATF2Q8N1L9 274 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 JAGN1Q8N5M9 183 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 SCCPDHQ8NBX0 429 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 PHYHIPQ92561 330 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 CCL17Q92583 94 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 FN3KRPQ9HA64 309 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 GCM1Q9NP62 436 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 SNTG1Q9NSN8 517 aa14.53□□□□□ -0.08
LIME1-208ENST00000493265 AK6Q9Y3D8 172 aaKnown RBP14.53□□□□□ -0.08
LIME1-208ENST00000493265 LRP5LA4QPB2 252 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 TMEM210A6NLX4 147 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 ADRA2CP18825 462 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 FGF9P31371 208 aaPredicted RBP14.52□□□□□ -0.09
LIME1-208ENST00000493265 KISS1Q15726 138 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 DEFB113Q30KQ7 82 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 LRRTM1Q86UE6 522 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 ZNF573Q86YE8 665 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 CALHM1Q8IU99 346 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 CELF2-AS1Q8N7Q2 184 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 YIPF5Q969M3 257 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 MBD6Q96DN6 1003 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 KCTD7Q96MP8 289 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 FAM192AQ9GZU8 254 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 OR51I2Q9H344 312 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 ZNF701Q9NV72 531 aaPredicted RBP14.52□□□□□ -0.09
LIME1-208ENST00000493265 DCAF16Q9NXF7 216 aa14.52□□□□□ -0.09
LIME1-208ENST00000493265 SHISA3A0PJX4 238 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 CCDC160A6NGH7 325 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 C3orf80F5H4A9 247 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 SPRY1O43609 319 aaPredicted RBP14.51□□□□□ -0.09
LIME1-208ENST00000493265 RHBDL1O75783 438 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 CYB5R3P00387 301 aaPredicted RBP14.51□□□□□ -0.09
LIME1-208ENST00000493265 FOSL1P15407 271 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 ZNF93P35789 620 aaPredicted RBP14.51□□□□□ -0.09
LIME1-208ENST00000493265 PMELP40967 661 aa14.51□□□□□ -0.09
LIME1-208ENST00000493265 VBP1P61758 197 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms