RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MRPL48Q96GC5 212 aaKnown RBP2.12□□□□□ -2.07
CLK1-213ENST00000492793 FAM19A4Q96LR4 140 aa2.12□□□□□ -2.07
CLK1-213ENST00000492793 BCL7BQ9BQE9 202 aa2.12□□□□□ -2.07
CLK1-213ENST00000492793 FBXO44Q9H4M3 255 aa2.12□□□□□ -2.07
CLK1-213ENST00000492793 RAB23Q9ULC3 237 aa2.12□□□□□ -2.07
CLK1-213ENST00000492793 MIA3Q5JRA6 1907 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 IGHV3OR16-8A0A075B7F1 116 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 OR6C70A6NIJ9 312 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 H7C2Y5 167 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 PLEKHA8P1O95397 391 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 LHBP01229 141 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 IGKV4-1P06312 121 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 STAG3L2P0CL84 134 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 MPIP34949 423 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 TGFBR1P36897 503 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 CSKP41240 450 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 HCCSP53701 268 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 RPS11P62280 158 aaKnown RBP eCLIP2.11□□□□□ -2.07
CLK1-213ENST00000492793 ELF3P78545 371 aaPredicted RBP2.11□□□□□ -2.07
CLK1-213ENST00000492793 FLI1Q01543 452 aaPredicted RBP2.11□□□□□ -2.07
CLK1-213ENST00000492793 DUPD1Q68J44 220 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 DAZ4Q86SG3 579 aaKnown RBP2.11□□□□□ -2.07
CLK1-213ENST00000492793 FAM131CQ96AQ9 280 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 RNF170Q96K19 258 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 SEC22CQ9BRL7 303 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 STMN4Q9H169 189 aaPredicted RBP2.11□□□□□ -2.07
CLK1-213ENST00000492793 KIR3DX1Q9H7L2 352 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 FANCEQ9HB96 536 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 DAZ1Q9NQZ3 744 aaKnown RBP2.11□□□□□ -2.07
CLK1-213ENST00000492793 IL37Q9NZH6 218 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 CFL2Q9Y281 166 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 KLF12Q9Y4X4 402 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 ORC6Q9Y5N6 252 aa2.11□□□□□ -2.07
CLK1-213ENST00000492793 SETD1AO15047 1707 aaKnown RBP2.11□□□□□ -2.07
CLK1-213ENST00000492793 SBNO1A3KN83 1393 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 SEC16AO15027 2179 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 SHANK1Q9Y566 2161 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 NPHP4O75161 1426 aaPredicted RBP2.1□□□□□ -2.07
CLK1-213ENST00000492793 IGHV6-1A0A0B4J1U7 121 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 ZNF233A6NK53 670 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 J3QT63 122 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 NDUFS5O43920 106 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 NRASP01111 189 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 HRASP01112 189 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 KRASP01116 189 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 IGLV7-43P04211 117 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 CDK1P06493 297 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 NELFEP18615 380 aaKnown RBP2.1□□□□□ -2.07
CLK1-213ENST00000492793 IVDP26440 423 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 KRTAP10-10P60014 251 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 PSMC5P62195 406 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 IFFO1Q0D2I5 559 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 IL15RAQ13261 267 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 C6orf183Q5T699 404 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 FAM131AQ6UXB0 335 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 ITPRIPQ8IWB1 547 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 ZCCHC24Q8N2G6 241 aaKnown RBP2.1□□□□□ -2.07
CLK1-213ENST00000492793 OR4A15Q8NGL6 344 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 ZNF420Q8TAQ5 688 aaPredicted RBP2.1□□□□□ -2.07
CLK1-213ENST00000492793 KLF14Q8TD94 323 aaPredicted RBP2.1□□□□□ -2.07
CLK1-213ENST00000492793 TSNAXQ99598 290 aaKnown RBP2.1□□□□□ -2.07
CLK1-213ENST00000492793 BEX2Q9BXY8 128 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 OR51B5Q9H339 312 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 VAX2Q9UIW0 290 aa2.1□□□□□ -2.07
CLK1-213ENST00000492793 NOTCH2Q04721 2471 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 IGHV2OR16-5A0A0B4J2B6 119 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 C16orf90A8MZG2 172 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 SEC14L6B5MCN3 397 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 CLDN34H7C241 214 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 TRAPPC6AO75865 159 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 RHOCP08134 193 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 HLA-GP17693 338 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 ARR3P36575 388 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 TAS2R60P59551 318 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 RPL31P62899 125 aaKnown RBP2.09□□□□□ -2.07
CLK1-213ENST00000492793 ATP5G2Q06055 141 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 PMVKQ15126 192 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 NDUFAF6Q330K2 333 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 TBPL2Q6SJ96 375 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 C16orf47Q6ZP98 133 aaPredicted RBP2.09□□□□□ -2.07
CLK1-213ENST00000492793 C1orf64Q8NEQ6 169 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 OR51A7Q8NH64 312 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 RBPMSQ93062 196 aaKnown RBP2.09□□□□□ -2.07
CLK1-213ENST00000492793 CENPNQ96H22 339 aaPredicted RBP2.09□□□□□ -2.07
CLK1-213ENST00000492793 DERL3Q96Q80 235 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 SHANK2-AS3Q9BTD1 123 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 MRPL20Q9BYC9 149 aaKnown RBP2.09□□□□□ -2.07
CLK1-213ENST00000492793 GAL3ST2Q9H3Q3 398 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 PLEKHF2Q9H8W4 249 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 LINC00574Q9H8X3 128 aa2.09□□□□□ -2.07
CLK1-213ENST00000492793 IGKV2-24A0A0C4DH68 120 aa2.08□□□□□ -2.08
CLK1-213ENST00000492793 FAM240AA0A1B0GVK7 77 aa2.08□□□□□ -2.08
CLK1-213ENST00000492793 TMEM72A0PK05 275 aa2.08□□□□□ -2.08
CLK1-213ENST00000492793 DHRS3O75911 302 aa2.08□□□□□ -2.08
CLK1-213ENST00000492793 IGKV1-39P01597 117 aa2.08□□□□□ -2.08
CLK1-213ENST00000492793 IGKV1D-39P04432 117 aa2.08□□□□□ -2.08
CLK1-213ENST00000492793 PTNP21246 168 aa2.08□□□□□ -2.08
CLK1-213ENST00000492793 PAX6P26367 422 aa2.08□□□□□ -2.08
CLK1-213ENST00000492793 HLA-DMAP28067 261 aa2.08□□□□□ -2.08
CLK1-213ENST00000492793 DEKP35659 375 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms