RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	SLC7A6	Q92536	515 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	RCN3	Q96D15	328 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	NMD3	Q96D46	503 aa	Known RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	PYURF	Q96I23	114 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	AKR1E2	Q96JD6	320 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	HSH2D	Q96JZ2	352 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	LRGUK	Q96M69	825 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	HIST1H2AA	Q96QV6	131 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	ELAC2	Q9BQ52	826 aa	Known RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	DCLRE1B	Q9H816	532 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	HEXA-AS1	Q9H8Q6	139 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	GORASP2	Q9H8Y8	452 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF556	Q9HAH1	456 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	ISYNA1	Q9NPH2	558 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	IL1RAP	Q9NPH3	570 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	SCRT2	Q9NQ03	307 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	C1orf123	Q9NWV4	160 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	MAGEL2	Q9UJ55	1249 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	A4GNT	Q9UNA3	340 aa		4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	COA3	Q9Y2R0	106 aa	Predicted RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	APOB	P04114	4563 aa	Known RBP	4.21	□□□□□ -1.74
SEC13-219	ENST00000492602	hCG_1809904	A0A1W2PP81	198 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602		A0A1W2PPE2	198 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602		A0A1W2PR64	198 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602		A0A1W2PRV1	198 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	PRSS29P	A6NIE9	313 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602		A6NLC8	198 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	AP4M1	O00189	453 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	GNGT2	O14610	69 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	ACOT8	O14734	319 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	SAP30	O75446	220 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	RHBDL1	O75783	438 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	FABP3	P05413	133 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	GRP	P07492	148 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	TSPAN19	P0C672	248 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	H2AFX	P16104	143 aa	Predicted RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	NDUFB7	P17568	137 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	FAS	P25445	335 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	HSD11B1	P28845	292 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	FMO3	P31513	532 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	GNAL	P38405	381 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	DDOST	P39656	456 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	ACTR3	P61158	418 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	SPIB	Q01892	262 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	SLC34A1	Q06495	639 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	MFGE8	Q08431	387 aa	Predicted RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	ENDOG	Q14249	297 aa	Known RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	KIR2DS1	Q14954	304 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	SEC23B	Q15437	767 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	KCNMB1	Q16558	191 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	RFX4	Q33E94	735 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM98B	Q52LJ0	330 aa	Known RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	TBPL2	Q6SJ96	375 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	FBXW12	Q6X9E4	464 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	TSEN54	Q7Z6J9	526 aa	Known RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	VTCN1	Q7Z7D3	282 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	LYPD6	Q86Y78	171 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM185A	Q8N0U4	392 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602		Q8N1Y9	231 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	ARHGAP24	Q8N264	748 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	PROKR2	Q8NFJ6	384 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	OR9Q1	Q8NGQ5	310 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	OR13C2	Q8NGS9	318 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	ITFG2	Q969R8	447 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	EME1	Q96AY2	570 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	OTULIN	Q96BN8	352 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	MALSU1	Q96EH3	234 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	RSRC1	Q96IZ7	334 aa	Known RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602		Q96M85	177 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	NSMCE2	Q96MF7	247 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	NOL4L	Q96MY1	436 aa	Predicted RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	COQ7	Q99807	217 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	NUAK2	Q9H093	628 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM107B	Q9H098	131 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	SYT4	Q9H2B2	425 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	CCDC134	Q9H6E4	229 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	YY1AP1	Q9H869	796 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	WDR76	Q9H967	626 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	ABCB9	Q9NP78	766 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	EMC7	Q9NPA0	242 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	NRIP3	Q9NQ35	241 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	DCAF13	Q9NV06	445 aa	Known RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	VSX1	Q9NZR4	365 aa	Predicted RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	BAIAP2	Q9UQB8	552 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	KLK5	Q9Y337	293 aa	Predicted RBP	4.2	□□□□□ -1.74
SEC13-219	ENST00000492602	DNAH6	Q9C0G6	4158 aa		4.2	□□□□□ -1.74
SEC13-219	ENST00000492602		A0A1B0GWJ7	208 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602		A0A1W2PPH5	198 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	ANXA2P2	A6NMY6	339 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	RIIAD1	A6NNX1	92 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	ARPC3	O15145	178 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	RER1	O15258	196 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	PSPN	O60542	156 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	PTP4A3	O75365	173 aa		4.19	□□□□□ -1.74
SEC13-219	ENST00000492602	TIPRL	O75663	272 aa		4.19	□□□□□ -1.74

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