RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 A0A1B0GW55 424 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 TEX46H3BTG2 121 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 TSPAN4O14817 238 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 DUX4L2P0CJ85 424 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 DUX4L3P0CJ86 424 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 DUX4L4P0CJ87 422 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 DUX4L5P0CJ88 424 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 DUX4L6P0CJ89 424 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 DUX4L7P0CJ90 424 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 MMP16P51512 607 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 BTN1A1Q13410 526 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 NKPD1Q17RQ9 610 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 ZNF260Q3ZCT1 412 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 CDNFQ49AH0 187 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 NSUN5P2Q63ZY6 315 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 C17orf107Q6ZR85 190 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 FJX1Q86VR8 437 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 RNF133Q8WVZ7 376 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 ST8SIA2Q92186 375 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 FGGYQ96C11 551 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 CNTD2Q9H8S5 307 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 BCO1Q9HAY6 547 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 COMMD9Q9P000 198 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 DUX4Q9UBX2 424 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 GLS2Q9UI32 602 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 VSIG4Q9Y279 399 aa19.84■□□□□ 0.77
USF3-203ENST00000491165 IGKV1D-43A0A0B4J1Z2 117 aa19.83■□□□□ 0.77
USF3-203ENST00000491165 CARD17Q5XLA6 110 aa19.83■□□□□ 0.77
USF3-203ENST00000491165 ZNF813Q6ZN06 617 aa19.83■□□□□ 0.77
USF3-203ENST00000491165 TRAPPC6BQ86SZ2 158 aa19.83■□□□□ 0.77
USF3-203ENST00000491165 FAM46BQ96A09 425 aa19.83■□□□□ 0.77
USF3-203ENST00000491165 PDCD10Q9BUL8 212 aa19.83■□□□□ 0.77
USF3-203ENST00000491165 MRPL13Q9BYD1 178 aaKnown RBP19.83■□□□□ 0.77
USF3-203ENST00000491165 CALHM2Q9HA72 323 aa19.83■□□□□ 0.77
USF3-203ENST00000491165 FIGNL2A6NMB9 653 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 RAB27BO00194 218 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 WDR1O75083 606 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 PGA4P0DJD7 388 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 PGA3P0DJD8 388 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 ATF4P18848 351 aaPredicted RBP19.82■□□□□ 0.76
USF3-203ENST00000491165 HSD11B1P28845 292 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 ZNF345Q14585 488 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 ZMYND11Q15326 602 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 NAXEQ8NCW5 288 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 ST8SIA4Q92187 359 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 PCNX1Q96RV3 2341 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 MPZP25189 248 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 GNALP38405 381 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 FOXF2Q12947 444 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 RNPS1Q15287 305 aaKnown RBP19.82■□□□□ 0.76
USF3-203ENST00000491165 PHYHD1Q5SRE7 291 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 P4HA3Q7Z4N8 544 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 SLC25A42Q86VD7 318 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 TMEM123Q8N131 208 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 KCNRGQ8N5I3 272 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 ST6GALNAC3Q8NDV1 305 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 PXT1Q8NFP0 134 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 FAM206AQ9NX38 181 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 GPR160Q9UJ42 338 aa19.82■□□□□ 0.76
USF3-203ENST00000491165 KANTRA0A1W2PQU2 76 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 WIPF3A6NGB9 483 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 PRRG2O14669 202 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 OR2F2O95006 317 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 SLC25A4P12235 298 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 MRPL49Q13405 166 aaKnown RBP19.81■□□□□ 0.76
USF3-203ENST00000491165 OR2F1Q13607 317 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 GUSBP1Q15486 140 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 C11orf87Q6NUJ2 197 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 KLHL24Q6TFL4 600 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 NUFIP2Q7Z417 695 aaKnown RBP19.81■□□□□ 0.76
USF3-203ENST00000491165 LYG2Q86SG7 212 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 RELL2Q8NC24 303 aaPredicted RBP19.81■□□□□ 0.76
USF3-203ENST00000491165 CHST4Q8NCG5 386 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 OR10H5Q8NGA6 315 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 OR6X1Q8NH79 312 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 TNFSF18Q9UNG2 199 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 MBD3L4A6NDZ8 208 aaPredicted RBP19.81■□□□□ 0.76
USF3-203ENST00000491165 MBD3L3A6NE82 208 aaPredicted RBP19.81■□□□□ 0.76
USF3-203ENST00000491165 MBD3L5A6NJ08 208 aaPredicted RBP19.81■□□□□ 0.76
USF3-203ENST00000491165 BPNT1O95861 308 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 ZBTB25P24278 435 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 C1orf185Q5T7R7 199 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 SLC22A24Q8N4F4 322 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 PAQR4Q8N4S7 273 aaPredicted RBP19.81■□□□□ 0.76
USF3-203ENST00000491165 ZDHHC22Q8N966 263 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 OR52N4Q8NGI2 321 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 MBD3L2Q8NHZ7 208 aaPredicted RBP19.81■□□□□ 0.76
USF3-203ENST00000491165 WNT2BQ93097 391 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 INTS12Q96CB8 462 aaKnown RBP19.81■□□□□ 0.76
USF3-203ENST00000491165 SLAMF6Q96DU3 332 aa19.81■□□□□ 0.76
USF3-203ENST00000491165 TTRP02766 147 aa19.8■□□□□ 0.76
USF3-203ENST00000491165 FCGR2AP12318 317 aa19.8■□□□□ 0.76
USF3-203ENST00000491165 UNC119Q13432 240 aa19.8■□□□□ 0.76
USF3-203ENST00000491165 OR1M1Q8NGA1 313 aa19.8■□□□□ 0.76
USF3-203ENST00000491165 C11orf40Q8WZ69 217 aa19.8■□□□□ 0.76
USF3-203ENST00000491165 CMBLQ96DG6 245 aa19.8■□□□□ 0.76
USF3-203ENST00000491165 UQCC2Q9BRT2 126 aa19.8■□□□□ 0.76
USF3-203ENST00000491165 CCSO14618 274 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 SYT7O43581 403 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 IGHV3-9P01782 118 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms