RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SEC22CQ9BRL7 303 aa1.95□□□□□ -2.1
CD46-216ENST00000490278 ANGPTL4Q9BY76 406 aa1.95□□□□□ -2.1
CD46-216ENST00000490278 TBL1XR1Q9BZK7 514 aa1.95□□□□□ -2.1
CD46-216ENST00000490278 STMN4Q9H169 189 aaPredicted RBP1.95□□□□□ -2.1
CD46-216ENST00000490278 CA10Q9NS85 328 aa1.95□□□□□ -2.1
CD46-216ENST00000490278 RAB22AQ9UL26 194 aa1.95□□□□□ -2.1
CD46-216ENST00000490278 PPIL1Q9Y3C6 166 aa1.95□□□□□ -2.1
CD46-216ENST00000490278 KLF12Q9Y4X4 402 aa1.95□□□□□ -2.1
CD46-216ENST00000490278 TICRRQ7Z2Z1 1910 aa1.95□□□□□ -2.1
CD46-216ENST00000490278 NPHP4O75161 1426 aaPredicted RBP1.94□□□□□ -2.1
CD46-216ENST00000490278 A0A0G2JMP0 313 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 A0A0X1KG70 313 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 TMEM72A0PK05 275 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 CLDN34H7C241 214 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 SMC2O95347 1197 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 IGKV1-39P01597 117 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 IGKV1D-39P04432 117 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 PFN1P07737 140 aaKnown RBP1.94□□□□□ -2.1
CD46-216ENST00000490278 PRKACAP17612 351 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 GRB2P62993 217 aaKnown RBP1.94□□□□□ -2.1
CD46-216ENST00000490278 ST3GAL4Q11206 333 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 DAZ4Q86SG3 579 aaKnown RBP1.94□□□□□ -2.1
CD46-216ENST00000490278 FBXO36Q8NEA4 188 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 HGDQ93099 445 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 SHANK2-AS3Q9BTD1 123 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 DAZ1Q9NQZ3 744 aaKnown RBP1.94□□□□□ -2.1
CD46-216ENST00000490278 IFNKQ9P0W0 207 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 HMGXB4Q9UGU5 601 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 ENPP4Q9Y6X5 453 aa1.94□□□□□ -2.1
CD46-216ENST00000490278 IGKV3D-11A0A0A0MRZ8 115 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 IGHV2OR16-5A0A0B4J2B6 119 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 LOC100653049A0A140TA62 436 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.93□□□□□ -2.1
CD46-216ENST00000490278 KRT34O76011 436 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 IVDP26440 423 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 TGM4P49221 684 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 HCCSP53701 268 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 SLC35B1P78383 322 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 PRKCDQ05655 676 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 TRDNQ13061 729 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 TMEM69Q5SWH9 247 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 ZNF678Q5SXM1 525 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 CPTPQ5TA50 214 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 FAM104BQ5XKR9 115 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 PDPNQ86YL7 162 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 ZCCHC24Q8N2G6 241 aaKnown RBP1.93□□□□□ -2.1
CD46-216ENST00000490278 CYB561A3Q8NBI2 242 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 OR2M7Q8NG81 312 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 TFGQ92734 400 aaPredicted RBP1.93□□□□□ -2.1
CD46-216ENST00000490278 KIAA1143Q96AT1 154 aaPredicted RBP1.93□□□□□ -2.1
CD46-216ENST00000490278 MS4A8Q9BY19 250 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 KPTNQ9Y664 436 aa1.93□□□□□ -2.1
CD46-216ENST00000490278 RPRD2Q5VT52 1461 aaKnown RBP1.93□□□□□ -2.1
CD46-216ENST00000490278 BAZ2AQ9UIF9 1905 aaKnown RBP1.93□□□□□ -2.1
CD46-216ENST00000490278 TRIP11Q15643 1979 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 SIGLEC1Q9BZZ2 1709 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 GOLGA6L4A6NEF3 574 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 J3QT63 122 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 TRAPPC6AO75865 159 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 PLEKHA8P1O95397 391 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 IGHV1-46P01743 117 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 HLA-DMAP28067 261 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 CD34P28906 385 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 PSMB2P49721 201 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 PSMC5P62195 406 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 ATP5G2Q06055 141 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 BAMBIQ13145 260 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 FBXL19-AS1Q494R0 122 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 ZFAND6Q6FIF0 208 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 FAM131AQ6UXB0 335 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 BRD3OSQ6XYD6 125 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 ZNF420Q8TAQ5 688 aaPredicted RBP1.92□□□□□ -2.1
CD46-216ENST00000490278 ZFAND1Q8TCF1 268 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 TSNAXQ99598 290 aaKnown RBP1.92□□□□□ -2.1
CD46-216ENST00000490278 API5Q9BZZ5 524 aaKnown RBP1.92□□□□□ -2.1
CD46-216ENST00000490278 KIR3DX1Q9H7L2 352 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 C6orf50Q9HD87 102 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 LZTFL1Q9NQ48 299 aa1.92□□□□□ -2.1
CD46-216ENST00000490278 STX18Q9P2W9 335 aaKnown RBP1.92□□□□□ -2.1
CD46-216ENST00000490278 SEC16AO15027 2179 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 SHANK1Q9Y566 2161 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 H7C2Y5 167 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 NDUFS5O43920 106 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 ETHE1O95571 254 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 MBP02144 154 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 HLA-GP17693 338 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 COL8A2P25067 703 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 PAX6P26367 422 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 GNRHRP30968 328 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 RGS6P49758 472 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 MLF1P58340 268 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 TAS2R60P59551 318 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 LAMTOR4Q0VGL1 99 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 ZNF235Q14590 738 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 ATP6V1FQ16864 119 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 HSP90AA4PQ58FG1 418 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 NT5DC3Q86UY8 548 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 LRRC8AQ8IWT6 810 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 OR51L1Q8NGJ5 315 aa1.91□□□□□ -2.1
CD46-216ENST00000490278 ORAOV1Q8WV07 137 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms