RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	ZNF573	Q86YE8	665 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	EGFL6	Q8IUX8	553 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	PRSS35	Q8N3Z0	413 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	BPIFB2	Q8N4F0	458 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	OR2G2	Q8NGZ5	317 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	CCL13	Q99616	98 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	ALG8	Q9BVK2	526 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	AMBN	Q9NP70	447 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	GPR173	Q9NS66	373 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	NUP50	Q9UKX7	468 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	SLC7A11	Q9UPY5	501 aa		9.22	□□□□□ -0.93
GGA1-222	ENST00000489772	STAB1	Q9NY15	2570 aa		9.21	□□□□□ -0.93
GGA1-222	ENST00000489772	DNHD1	Q96M86	4753 aa		9.21	□□□□□ -0.93
GGA1-222	ENST00000489772	NKX6-3	A6NJ46	265 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	C22orf46	C9J442	243 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	DVL1	O14640	695 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	NDUFB3	O43676	98 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	GATB	O75879	557 aa	Known RBP	9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	ECD	O95905	644 aa	Predicted RBP	9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	FSHB	P01225	129 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	HTR1A	P08908	422 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	GLRA1	P23415	457 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	PEX2	P28328	305 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	HAAO	P46952	286 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	GALE	Q14376	348 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	ATPAF1	Q5TC12	328 aa	Predicted RBP	9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	TMEM244	Q5VVB8	128 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	STUM	Q69YW2	141 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	FDX2	Q6P4F2	183 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	LHFPL3	Q86UP9	236 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	RDH10	Q8IZV5	341 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	PNLDC1	Q8NA58	520 aa	Known RBP	9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	SPATA3	Q8NHX4	192 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	APH1B	Q8WW43	257 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	CYGB	Q8WWM9	190 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	ST8SIA4	Q92187	359 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	AQP3	Q92482	292 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	DACT3	Q96B18	629 aa	Predicted RBP	9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	C10orf35	Q96D05	121 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	SEH1L	Q96EE3	360 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	C4orf36	Q96KX1	117 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	SUCNR1	Q9BXA5	334 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	DNTTIP1	Q9H147	329 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	WDR13	Q9H1Z4	485 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	RASSF4	Q9H2L5	321 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	SMURF1	Q9HCE7	757 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	SNTG1	Q9NSN8	517 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	RASL12	Q9NYN1	266 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	FRRS1L	Q9P0K9	344 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	NLK	Q9UBE8	527 aa		9.21	□□□□□ -0.94
GGA1-222	ENST00000489772	LOC107986453	A0A1B0GWG9	222 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	PQLC2L	A1A4F0	135 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772		H3BSH0	61 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	GPR37	O15354	613 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	IGHA1	P01876	353 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	ISG15	P05161	165 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	KIR3DL2	P43630	455 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	CCR9	P51686	369 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	SRSF2	Q01130	221 aa	Known RBP	9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	GABPB1	Q06547	395 aa	Predicted RBP	9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	MRPL28	Q13084	256 aa	Known RBP	9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	IKZF1	Q13422	519 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	LRRC10	Q5BKY1	277 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	ZNF691	Q5VV52	312 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	USP43	Q70EL4	1123 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	BTN2A1	Q7KYR7	527 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	SYS1	Q8N2H4	156 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	FAM216B	Q8N7L0	139 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	SETD9	Q8NE22	299 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	OR5T2	Q8NGG2	359 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	OR52I1	Q8NGK6	324 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	PP6455	Q8WZ26	134 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	TMIGD2	Q96BF3	282 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	UPRT	Q96BW1	309 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	JMJD8	Q96S16	334 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	SLC6A7	Q99884	636 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	VCX	Q9H320	206 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	MRPS18A	Q9NVS2	196 aa	Known RBP	9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	ERVK13-1	Q9NX77	482 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	MYRF	Q9Y2G1	1151 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	POLDIP2	Q9Y2S7	368 aa		9.2	□□□□□ -0.94
GGA1-222	ENST00000489772	FAM230A	A0A1W2PPH8	454 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	IRGM	A1A4Y4	181 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	OR2AT4	A6NND4	320 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	ZNF879	B4DU55	563 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772		J3QT63	122 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	WBP4	O75554	376 aa	Known RBP	9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	RGS9	O75916	674 aa	Predicted RBP	9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	CLIC3	O95833	236 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	RPSA	P08865	295 aa	Known RBP	9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	HILS1	P60008	231 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	NANOS3	P60323	173 aa	Known RBP	9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	FGF12	P61328	243 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	ELF3	P78545	371 aa	Predicted RBP	9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	IL13RA1	P78552	427 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	IL18R1	Q13478	541 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	UBE2V2	Q15819	145 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	SMIM21	Q3B7S5	101 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	KRTAP24-1	Q3LI83	254 aa		9.19	□□□□□ -0.94
GGA1-222	ENST00000489772	KLF17	Q5JT82	389 aa	Predicted RBP	9.19	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms