RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 GPER1Q99527 375 aa11.77□□□□□ -0.53
C9orf3-221ENST00000489562 PKIBQ9C010 78 aa11.77□□□□□ -0.53
C9orf3-221ENST00000489562 FGF23Q9GZV9 251 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-221ENST00000489562 RBM38Q9H0Z9 239 aaKnown RBP11.77□□□□□ -0.53
C9orf3-221ENST00000489562 TLNRD1Q9H1K6 362 aa11.77□□□□□ -0.53
C9orf3-221ENST00000489562 OR51I2Q9H344 312 aa11.77□□□□□ -0.53
C9orf3-221ENST00000489562 FN3KRPQ9HA64 309 aa11.77□□□□□ -0.53
C9orf3-221ENST00000489562 POLDIP2Q9Y2S7 368 aa11.77□□□□□ -0.53
C9orf3-221ENST00000489562 V9GY05 133 aa11.77□□□□□ -0.53
C9orf3-221ENST00000489562 ARID1AO14497 2285 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 LOC100289279A0A1B0GTE1 492 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 SHISA3A0PJX4 238 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 DPPA5A6NC42 116 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 A6NLC8 198 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 TMEM127O75204 238 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 CYB5AP00167 134 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 CD37P11049 281 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 PAX1P15863 534 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 ADRA2CP18825 462 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 MPZP25189 248 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 HAAOP46952 286 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 NCS1P62166 190 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 RIN1Q13671 783 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 DMRTC1Q5HYR2 192 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 WDR86Q86TI4 376 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 CROCCP3Q8IVE0 287 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 ZCCHC24Q8N2G6 241 aaKnown RBP11.76□□□□□ -0.53
C9orf3-221ENST00000489562 JAGN1Q8N5M9 183 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 HPS1Q92902 700 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 SORCS2Q96PQ0 1159 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 FAM192AQ9GZU8 254 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 RNF167Q9H6Y7 350 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 ZNF701Q9NV72 531 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-221ENST00000489562 RSL24D1Q9UHA3 163 aaKnown RBP11.76□□□□□ -0.53
C9orf3-221ENST00000489562 PPP1R3CQ9UQK1 317 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 CENPEQ02224 2701 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 LRBAP50851 2863 aa11.76□□□□□ -0.53
C9orf3-221ENST00000489562 IGKV1-27A0A075B6S5 117 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 NOTOA8MTQ0 251 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 H3BMQ9 156 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 NCR1O76036 304 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 CDRT1O95170 752 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 GRPP07492 148 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 DNASE1P24855 282 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 CFPP27918 469 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 CFHR2P36980 270 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 CDKN1AP38936 164 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 SERPINB10P48595 397 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 EFNA4P52798 201 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 CAPZA1P52907 286 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 IL24Q13007 206 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 ZNF181Q2M3W8 571 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 C1orf100Q5SVJ3 147 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 HAGHLQ6PII5 290 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-221ENST00000489562 LYPD6Q86Y78 171 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 MKXQ8IYA7 352 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 SAXO1Q8IYX7 474 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 ZSCAN4Q8NAM6 433 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-221ENST00000489562 SCCPDHQ8NBX0 429 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 OR6M1Q8NGM8 313 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 OR11L1Q8NGX0 322 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 OR10Z1Q8NGY1 313 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 ZNF671Q8TAW3 534 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 Q8TCH9 128 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 DGCR14Q96DF8 476 aaKnown RBP11.75□□□□□ -0.53
C9orf3-221ENST00000489562 SPACA5Q96QH8 159 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 BARX1Q9HBU1 254 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-221ENST00000489562 GCM1Q9NP62 436 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 MYOZ1Q9NP98 299 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-221ENST00000489562 DLL4Q9NR61 685 aa11.75□□□□□ -0.53
C9orf3-221ENST00000489562 AK6Q9Y3D8 172 aaKnown RBP11.75□□□□□ -0.53
C9orf3-221ENST00000489562 IGHV1-69-2A0A0G2JMI3 117 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 LRRC30A6NM36 301 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 SLC17A2O00624 439 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 F12P00748 615 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-221ENST00000489562 ACAA1P09110 424 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-221ENST00000489562 IRF2P14316 349 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 TGFBR1P36897 503 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 PTGFRP43088 359 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 POU3F4P49335 361 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 KRTAP10-9P60411 292 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 ZP1P60852 638 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 PDZK1IP1Q13113 114 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 PRAMEF6Q5VXH4 476 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 MOGAT3Q86VF5 341 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 CALHM1Q8IU99 346 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 C1orf87Q8N0U7 546 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 PXT1Q8NFP0 134 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 AQP3Q92482 292 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 RDH5Q92781 318 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 NINJ1Q92982 152 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 C12orf43Q96C57 262 aaKnown RBP11.74□□□□□ -0.53
C9orf3-221ENST00000489562 S100A13Q99584 98 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 GFI1Q99684 422 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 DCSTAMPQ9H295 470 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 LIME1Q9H400 295 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 RHOFQ9HBH0 211 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 PLGRKTQ9HBL7 147 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 PCDHB16Q9NRJ7 776 aa11.74□□□□□ -0.53
C9orf3-221ENST00000489562 BEX4Q9NWD9 120 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms