RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 ANKRA2Q9H9E1 313 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 CXorf21Q9HAI6 301 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 BCL2L10Q9HD36 194 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 C14orf105Q9NVL8 296 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 DDX18Q9NVP1 670 aaKnown RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 ARMC1Q9NVT9 282 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 MAT2BQ9NZL9 334 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 STX18Q9P2W9 335 aaKnown RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 SPRR3Q9UBC9 169 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 WARS2Q9UGM6 360 aaKnown RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 KLK13Q9UKR3 277 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 ANGPTL2Q9UKU9 493 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 C15orf41Q9Y2V0 281 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 AP4S1Q9Y587 144 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 NPTNQ9Y639 398 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 FRYLO94915 3013 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 SCN2AQ99250 2005 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 EP300Q09472 2414 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-216ENST00000487043 SEC16AO15027 2179 aa3.1□□□□□ -1.91
PTCD3-216ENST00000487043 ZFHX2Q9C0A1 2572 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 MUC6Q6W4X9 2439 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 A0A1B0GUS0 222 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 SPAARA0A1B0GVQ0 90 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 DHRS12A0PJE2 317 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 IDSB3KWA1 339 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 B4DXG7 233 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 C5orf58C9J3I9 102 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 RAMP3O60896 148 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 ALOX12BO75342 701 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 SERPINB7O75635 380 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 KLF7O75840 302 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 SERPINA1P01009 418 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 IFNA14P01570 189 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 IGKV3-11P04433 115 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 IFNA16P05015 189 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 GUSBP08236 651 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 RPSAP08865 295 aaKnown RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 ETS2P15036 469 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 LEPP41159 167 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 STARP49675 285 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 ERFP50548 548 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 DAP3P51398 398 aaKnown RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 EFNA3P52797 238 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 CRISP3P54108 245 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 EMP2P54851 167 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 SELENOWP63302 87 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 MRPS22P82650 360 aaKnown RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 CHRNB3Q05901 458 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 KLRB1Q12918 225 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 GNA13Q14344 377 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 TGIF1Q15583 401 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 ARHGAP11BQ3KRB8 267 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 GLYR1Q49A26 553 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 HES3Q5TGS1 186 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 MLIPQ5VWP3 458 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 TNFAIP8L2Q6P589 184 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 TMEM205Q6UW68 189 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 LRRC74BQ6ZQY2 392 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 EIF3MQ7L2H7 374 aaKnown RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 ASCL5Q7RTU5 278 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 POM121L12Q8N7R1 296 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF615Q8N8J6 731 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 DRAXINQ8NBI3 349 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 MORN4Q8NDC4 146 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 CATSPER1Q8NEC5 780 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 OR52R1Q8NGF1 315 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 OR5D16Q8NGK9 328 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 DOK4Q8TEW6 326 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 TCTEX1D2Q8WW35 142 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 PYDC1Q8WXC3 89 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 TSLPQ969D9 159 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 MAL2Q969L2 176 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 PPP1R14BQ96C90 147 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 PYURFQ96I23 114 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 RNF145Q96MT1 663 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 NOL4LQ96MY1 436 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 MS4A4EQ96PG1 132 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 TRNT1Q96Q11 434 aaKnown RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 CLCC1Q96S66 551 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 STACQ99469 402 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 CHID1Q9BWS9 393 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 ULBP3Q9BZM4 244 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 CHIAQ9BZP6 476 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 FAM192AQ9GZU8 254 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 VCX3BQ9H321 246 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 VCX3AQ9NNX9 186 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 ADAP2Q9NPF8 381 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 EXD2Q9NVH0 621 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 CLEC5AQ9NY25 188 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 CALML5Q9NZT1 146 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 ZNF581Q9P0T4 197 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 DPM3Q9P2X0 92 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 CTSFQ9UBX1 484 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 PISDQ9UG56 409 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 NXT1Q9UKK6 140 aaKnown RBP3.09□□□□□ -1.91
PTCD3-216ENST00000487043 ANGPT4Q9Y264 503 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 CFL2Q9Y281 166 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 KCNE3Q9Y6H6 103 aa3.09□□□□□ -1.91
PTCD3-216ENST00000487043 VPS13AQ96RL7 3174 aa3.09□□□□□ -1.92
PTCD3-216ENST00000487043 PCNX3Q9H6A9 2034 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms