RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TAL2Q16559 108 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 KLHL12Q53G59 568 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 DEGS2Q6QHC5 323 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 IGFL1Q6UW32 110 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 PID1Q7Z2X4 250 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 ZNF101Q8IZC7 436 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 ORMDL3Q8N138 153 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 TRIML2Q8N7C3 387 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 SLC25A29Q8N8R3 303 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 APCDD1LQ8NCL9 501 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 S100PBPQ96BU1 408 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 LRRC39Q96DD0 335 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 RMI2Q96E14 147 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 SIKE1Q9BRV8 207 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 C1orf50Q9BV19 199 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 MAP1LC3CQ9BXW4 147 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 WDR55Q9H6Y2 383 aaPredicted RBP2.59□□□□□ -1.99
SMC4-218ENST00000486711 PPIL1Q9Y3C6 166 aa2.59□□□□□ -1.99
SMC4-218ENST00000486711 PCM1Q15154 2024 aa2.59□□□□□ -2
SMC4-218ENST00000486711 ZNF608Q9ULD9 1512 aaPredicted RBP2.58□□□□□ -2
SMC4-218ENST00000486711 TRAV8-7A0A075B6U6 113 aa2.58□□□□□ -2
SMC4-218ENST00000486711 IGHV6-1A0A0B4J1U7 121 aa2.58□□□□□ -2
SMC4-218ENST00000486711 CCL15-CCL14A0A0B4J2E2 113 aa2.58□□□□□ -2
SMC4-218ENST00000486711 A0A0G2JMP0 313 aa2.58□□□□□ -2
SMC4-218ENST00000486711 A0A0X1KG70 313 aa2.58□□□□□ -2
SMC4-218ENST00000486711 FAM240AA0A1B0GVK7 77 aa2.58□□□□□ -2
SMC4-218ENST00000486711 CCNOP22674 350 aa2.58□□□□□ -2
SMC4-218ENST00000486711 IL3RAP26951 378 aa2.58□□□□□ -2
SMC4-218ENST00000486711 GALR1P47211 349 aa2.58□□□□□ -2
SMC4-218ENST00000486711 RGS6P49758 472 aa2.58□□□□□ -2
SMC4-218ENST00000486711 GRB2P62993 217 aaKnown RBP2.58□□□□□ -2
SMC4-218ENST00000486711 VAMP3Q15836 100 aa2.58□□□□□ -2
SMC4-218ENST00000486711 CCL15Q16663 113 aa2.58□□□□□ -2
SMC4-218ENST00000486711 CDNFQ49AH0 187 aa2.58□□□□□ -2
SMC4-218ENST00000486711 LUZP6Q538Z0 58 aa2.58□□□□□ -2
SMC4-218ENST00000486711 DNLZQ5SXM8 178 aa2.58□□□□□ -2
SMC4-218ENST00000486711 PRSS54Q6PEW0 395 aa2.58□□□□□ -2
SMC4-218ENST00000486711 RNF10Q8N5U6 811 aaKnown RBP2.58□□□□□ -2
SMC4-218ENST00000486711 SLC35G3Q8N808 338 aa2.58□□□□□ -2
SMC4-218ENST00000486711 ST20-AS1Q8NBB2 130 aa2.58□□□□□ -2
SMC4-218ENST00000486711 LRRC20Q8TCA0 184 aa2.58□□□□□ -2
SMC4-218ENST00000486711 NT5CQ8TCD5 201 aa2.58□□□□□ -2
SMC4-218ENST00000486711 GLT1D1Q96MS3 346 aa2.58□□□□□ -2
SMC4-218ENST00000486711 IP6K3Q96PC2 410 aa2.58□□□□□ -2
SMC4-218ENST00000486711 UTP23Q9BRU9 249 aaKnown RBP2.58□□□□□ -2
SMC4-218ENST00000486711 FRMD8P1Q9BZ68 369 aaPredicted RBP2.58□□□□□ -2
SMC4-218ENST00000486711 COA1Q9GZY4 146 aa2.58□□□□□ -2
SMC4-218ENST00000486711 ING2Q9H160 280 aa2.58□□□□□ -2
SMC4-218ENST00000486711 XKR8Q9H6D3 395 aa2.58□□□□□ -2
SMC4-218ENST00000486711 HAUS4Q9H6D7 363 aa2.58□□□□□ -2
SMC4-218ENST00000486711 PLEKHF2Q9H8W4 249 aa2.58□□□□□ -2
SMC4-218ENST00000486711 STK38LQ9Y2H1 464 aa2.58□□□□□ -2
SMC4-218ENST00000486711 AP3M1Q9Y2T2 418 aa2.58□□□□□ -2
SMC4-218ENST00000486711 ORC6Q9Y5N6 252 aa2.58□□□□□ -2
SMC4-218ENST00000486711 YEATS2Q9ULM3 1422 aa2.58□□□□□ -2
SMC4-218ENST00000486711 LGALS9O00182 355 aa2.57□□□□□ -2
SMC4-218ENST00000486711 TCAPO15273 167 aa2.57□□□□□ -2
SMC4-218ENST00000486711 NDUFS5O43920 106 aa2.57□□□□□ -2
SMC4-218ENST00000486711 ZNF14P17017 642 aaPredicted RBP2.57□□□□□ -2
SMC4-218ENST00000486711 HLA-GP17693 338 aa2.57□□□□□ -2
SMC4-218ENST00000486711 MPV17P39210 176 aa2.57□□□□□ -2
SMC4-218ENST00000486711 TTC32Q5I0X7 151 aa2.57□□□□□ -2
SMC4-218ENST00000486711 IDNKQ5T6J7 187 aa2.57□□□□□ -2
SMC4-218ENST00000486711 MED27Q6P2C8 311 aa2.57□□□□□ -2
SMC4-218ENST00000486711 CA13Q8N1Q1 262 aa2.57□□□□□ -2
SMC4-218ENST00000486711 HGDQ93099 445 aa2.57□□□□□ -2
SMC4-218ENST00000486711 MSANTD3Q96H12 275 aa2.57□□□□□ -2
SMC4-218ENST00000486711 OR2M4Q96R27 311 aa2.57□□□□□ -2
SMC4-218ENST00000486711 ULBP2Q9BZM5 246 aa2.57□□□□□ -2
SMC4-218ENST00000486711 API5Q9BZZ5 524 aaKnown RBP2.57□□□□□ -2
SMC4-218ENST00000486711 SYT4Q9H2B2 425 aa2.57□□□□□ -2
SMC4-218ENST00000486711 VAPAQ9P0L0 249 aa2.57□□□□□ -2
SMC4-218ENST00000486711 RAB22AQ9UL26 194 aa2.57□□□□□ -2
SMC4-218ENST00000486711 LOC102724200A0A096LPH7 203 aaPredicted RBP2.56□□□□□ -2
SMC4-218ENST00000486711 TVP23AA6NH52 213 aa2.56□□□□□ -2
SMC4-218ENST00000486711 ZNF98A6NK75 572 aa2.56□□□□□ -2
SMC4-218ENST00000486711 CEACAM18A8MTB9 384 aa2.56□□□□□ -2
SMC4-218ENST00000486711 PRAMEF26H0Y7S4 382 aa2.56□□□□□ -2
SMC4-218ENST00000486711 M0R1B8 84 aa2.56□□□□□ -2
SMC4-218ENST00000486711 ZNF593O00488 134 aaPredicted RBP2.56□□□□□ -2
SMC4-218ENST00000486711 OR7C2O60412 319 aa2.56□□□□□ -2
SMC4-218ENST00000486711 NELFEP18615 380 aaKnown RBP2.56□□□□□ -2
SMC4-218ENST00000486711 BGNP21810 368 aa2.56□□□□□ -2
SMC4-218ENST00000486711 PAX6P26367 422 aa2.56□□□□□ -2
SMC4-218ENST00000486711 MPIP34949 423 aa2.56□□□□□ -2
SMC4-218ENST00000486711 GPR4P46093 362 aa2.56□□□□□ -2
SMC4-218ENST00000486711 ETV1P50549 477 aa2.56□□□□□ -2
SMC4-218ENST00000486711 CMC4P56277 68 aaPredicted RBP2.56□□□□□ -2
SMC4-218ENST00000486711 PMVKQ15126 192 aa2.56□□□□□ -2
SMC4-218ENST00000486711 SYT6Q5T7P8 510 aaPredicted RBP2.56□□□□□ -2
SMC4-218ENST00000486711 EPGNQ6UW88 154 aa2.56□□□□□ -2
SMC4-218ENST00000486711 CASP12Q6UXS9 341 aa2.56□□□□□ -2
SMC4-218ENST00000486711 ZCCHC24Q8N2G6 241 aaKnown RBP2.56□□□□□ -2
SMC4-218ENST00000486711 OR6K2Q8NGY2 324 aa2.56□□□□□ -2
SMC4-218ENST00000486711 DOK4Q8TEW6 326 aa2.56□□□□□ -2
SMC4-218ENST00000486711 CDKL2Q92772 493 aa2.56□□□□□ -2
SMC4-218ENST00000486711 WDR34Q96EX3 536 aa2.56□□□□□ -2
SMC4-218ENST00000486711 C20orf144Q9BQM9 153 aa2.56□□□□□ -2
SMC4-218ENST00000486711 RHOXF2Q9BQY4 288 aa2.56□□□□□ -2
SMC4-218ENST00000486711 TMED9Q9BVK6 235 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms